BHI                     Biological Homogeneity Index
BSI                     Biological Stability Index
annotationListToMatrix
                        Change annotation list to matrix
clValid                 Validate Cluster Results
clValid-class           Class "clValid"
connectivity            Connectivity Measure
dunn                    Dunn Index
getRanksWeights         Extract ranks and weights from clValid object
mouse                   Mouse Mesenchymal Cells
plot.sota               Plot Function for a SOTA Object
print.sota              Print Function for a SOTA Object
readAnnotationFile      Read in biological annotation files from
                        external file
sota                    Self-organizing Tree Algorithm (SOTA)
stability               Stability Measures
