analysisEachCluster	analysisEachCluster
bootStrapPeaks	bootStrapPeaks
calculateKsDistribution4wgd_multiple	calculateKsDistribution4wgd_multiple
CalHomoConcentration	CalHomoConcentration
CalPvalue	CalPvalue
checkFileExistence	checkFileExistence
check_gff_from_file	check_gff_from_file
check_gff_input	check_gff_input
check_proteome_from_file	check_proteome_from_file
check_proteome_input	check_proteome_input
cluster_synteny	cluster_synteny
computing_depth	computing_depth
computing_depth_paranome	computing_depth_paranome
CountOrthologs	CountOrthologs
create_ksrates_cmd	create_ksrates_cmd
create_ksrates_cmd_from_table	create_ksrates_cmd_from_table
create_ksrates_configure_file_based_on_table	create_ksrates_configure_file_based_on_table
create_ksrates_configure_file_v2	create_ksrates_configure_file_v2
create_ksrates_expert_parameter_file	create_ksrates_expert_parameter_file
dfltBWrange	dfltBWrange
dfltCounts	dfltCounts
downloadButton_custom	downloadButton_custom
drvkde	drvkde
extractCluster	extractCluster
extract_first_part	extract_first_part
find_peaks	find_peaks
generateKsDistribution	generateKsDistribution
generate_ksd	generate_ksd
get_segments	get_segments
is.ksv	is.ksv
is.not.null	is.not.null
is_fasta_cds	is_fasta_cds
ks_mclust_v2	ks_mclust_v2
map_informal_name_to_latin_name	map_informal_name_to_latin_name
mix_logNormal_Ks	mix_logNormal_Ks
modeFinder	modeFinder
obtain_chromosome_length	obtain_chromosome_length
obtain_chromosome_length_filter	obtain_chromosome_length_filter
obtain_coordiantes_for_anchorpoints	obtain_coordiantes_for_anchorpoints
obtain_coordiantes_for_anchorpoints_ks	obtain_coordiantes_for_anchorpoints_ks
obtain_coordiantes_for_segments	obtain_coordiantes_for_segments
obtain_coordinates_for_segments_multiple	obtain_coordinates_for_segments_multiple
obtain_mean_ks_for_each_multiplicon	obtain_mean_ks_for_each_multiplicon
parse_EMMIX	parse_EMMIX
parse_one_EMMIX	parse_one_EMMIX
PeaksInKsDistributionValues	PeaksInKsDistributionValues
read.wgd_ksd	read.wgd_ksd
read_data_file	read_data_file
relativeRate	relativeRate
remove_inner_stop_codon_sequence	remove_inner_stop_codon_sequence
remove_old_dirs	remove_old_dirs
replace_informal_name_to_latin_name	replace_informal_name_to_latin_name
resampleKsDistribution	resampleKsDistribution
runshinyWGD	runshinyWGD
run_emmix_kmeas	run_emmix_kmeas
SignifFeatureRegion	SignifFeatureRegion
SiZer	SiZer
symconv.ks	symconv.ks
symconv2D.ks	symconv2D.ks
symconv3D.ks	symconv3D.ks
symconv4D.ks	symconv4D.ks
TimeTreeFecher	TimeTreeFecher
