hwde: Models and Tests for Departure from Hardy-Weinberg Equilibrium
and Independence Between Loci
Fits models for genotypic disequilibria, as described in
Huttley and Wilson (2000) <doi:10.1093/genetics/156.4.2127>, Weir (1996) and Weir and Wilson (1986).
Contrast terms are available that account for first order interactions
between loci. Also implements, for a single locus in a single
population, a conditional exact test for Hardy-Weinberg equilibrium.
| Version: |
0.67-3 |
| Depends: |
R (≥ 2.0) |
| Published: |
2023-08-21 |
| DOI: |
10.32614/CRAN.package.hwde |
| Author: |
John Maindonald, with \code{hwexact()} from Randall Johnson. |
| Maintainer: |
John Maindonald <jhmaindonald at gmail.com> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| Copyright: |
(c) John Curtin Research School of Medical Sciences and
Centre for Mathematics and Its Applications, The Australian
National University |
| URL: |
https://github.com/jhmaindonald/hwde |
| NeedsCompilation: |
no |
| Materials: |
NEWS |
| CRAN checks: |
hwde results |
Documentation:
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