# Generated by roxygen2: do not edit by hand

export(aggregateAcrossCells)
export(aggregateAcrossGenes)
export(analyze)
export(buildSnnGraph)
export(centerSizeFactors)
export(chooseHighlyVariableGenes)
export(choosePseudoCount)
export(clusterGraph)
export(clusterKmeans)
export(combineFactors)
export(computeAdtQcMetrics)
export(computeClrm1Factors)
export(computeCrisprQcMetrics)
export(computeRnaQcMetrics)
export(convertAnalyzeResults)
export(correctMnn)
export(filterAdtQcMetrics)
export(filterCrisprQcMetrics)
export(filterRnaQcMetrics)
export(fitVarianceTrend)
export(modelGeneVariances)
export(normalizeCounts)
export(reportGroupMarkerStatistics)
export(runAllNeighborSteps)
export(runPca)
export(runTsne)
export(runUmap)
export(sanitizeSizeFactors)
export(scaleByNeighbors)
export(scoreGeneSet)
export(scoreMarkers)
export(subsampleByNeighbors)
export(suggestAdtQcThresholds)
export(suggestCrisprQcThresholds)
export(suggestRnaQcThresholds)
export(summarizeEffects)
export(testEnrichment)
export(tsnePerplexityToNeighbors)
importFrom(BiocNeighbors,AnnoyParam)
importFrom(BiocNeighbors,buildIndex)
importFrom(BiocNeighbors,defineBuilder)
importFrom(BiocNeighbors,findDistance)
importFrom(BiocNeighbors,findKNN)
importFrom(DelayedArray,DelayedArray)
importFrom(DelayedArray,t)
importFrom(Rcpp,sourceCpp)
importFrom(beachmat,initializeCpp)
importFrom(beachmat,tatami.dim)
importFrom(beachmat,tatami.subset)
importFrom(methods,is)
importFrom(parallel,makeCluster)
importFrom(parallel,parLapply)
importFrom(parallel,stopCluster)
useDynLib(scrapper)
