| addValidationData | Add Validation Data to ClustAllObject |
| addValidationData-method | Add Validation Data to ClustAllObject |
| characterOrNA-class | Class Union: characterOrNA |
| ClustAllObject-class | ClustAllObject |
| cluster2data | Export Stratification Results with Original Data |
| cluster2data-method | Export Stratification Results with Original Data |
| createClustAll | Create ClustAllObject for Patient Stratification Analysis |
| createClustAll-method | Create ClustAllObject for Patient Stratification Analysis |
| dataImputed | Retrieve Imputed Data from ClustAllObject |
| dataImputed-method | Retrieve Imputed Data from ClustAllObject |
| dataOriginal | Retrieve Original Unprocessed Data from ClustAllObject |
| dataOriginal-method | Retrieve Original Unprocessed Data from ClustAllObject |
| dataValidation | Retrieve Validation Data from ClustAllObject |
| dataValidation-method | Retrieve Validation Data from ClustAllObject |
| extractData | extractData |
| extractData-method | extractData |
| extractResults | Extract Clustering Results from ClustAllObject |
| extractResults-method | Extract Clustering Results from ClustAllObject |
| heart_data | Heart Disease Dataset |
| initialize-method | initializeClustAllObject |
| JACCARD_DISTANCE_F | Retrieve Jaccard Distance Matrix for Robust Stratifications |
| JACCARD_DISTANCE_F-method | Retrieve Jaccard Distance Matrix for Robust Stratifications |
| listOrNULL-class | Class Union: listOrNULL |
| logicalOrNA-class | Class Union: logicalOrNA |
| matrixOrNULL-class | Class Union: matrixOrNULL |
| nImputation | Retrieve Number of Imputations from ClustAllObject |
| nImputation-method | Retrieve Number of Imputations from ClustAllObject |
| numericOrCharacter | Class Union: numericOrCharacter |
| numericOrCharacter-class | Class Union: numericOrCharacter |
| numericOrNA-class | Class Union: numericOrNA |
| obj_noNA1 | obj_noNA1: Processed wdbc dataset for testing purposed |
| obj_noNA1simplify | obj_noNA1simplify: Processed wdbc dataset for testing purposed |
| obj_noNAno1Validation | obj_noNAno1Validation: Processed wdbc dataset for testing purposed |
| plotJACCARD | Visualize Jaccard Distances Between Robust Stratifications |
| plotJACCARD-method | Visualize Jaccard Distances Between Robust Stratifications |
| plotSANKEY | Visualize Stratification Comparisons with Sankey Diagram |
| plotSANKEY-method | Visualize Stratification Comparisons with Sankey Diagram |
| processed | Check Processing Status of ClustAllObject |
| processed-method | Check Processing Status of ClustAllObject |
| resStratification | Extract Representative Stratifications from ClustAllObject |
| resStratification-method | Extract Representative Stratifications from ClustAllObject |
| runClustAll | Execute ClustALL Algorithm on a ClustAllObject |
| runClustAll-method | Execute ClustALL Algorithm on a ClustAllObject |
| show-method | Display Summary of ClustAllObject |
| showData | Retrieve Processed Data from ClustAllObject |
| showData-method | Retrieve Processed Data from ClustAllObject |
| summary_clusters | Retrieve Summary of Clustering Results from ClustAllObject |
| summary_clusters-method | Retrieve Summary of Clustering Results from ClustAllObject |
| validateStratification | Validate Stratification Results Against True Labels |
| validateStratification-method | Validate Stratification Results Against True Labels |
| wdbc | wdbc: Diagnostic Wisconsin Breast Cancer Database. |
| wdbcMIDS | wdbcMIDS: Diagnostic Wisconsin Breast Cancer Database with imputed values |
| wdbcNA | wdbcNA: Diagnostic Wisconsin Breast Cancer Database with missing values |