Package: gVenn
Title: Proportional Venn and UpSet Diagrams for Gene Sets and Genomic
        Regions
Version: 1.0.0
Authors@R: 
    person("Christophe", "Tav",
    email = "christophe.tav@gmail.com",
    role = c("aut", "cre"),
    comment = c(ORCID = "0000-0001-8808-9617"))
Description: Tools to compute and visualize overlaps between gene sets
        or genomic regions. Venn diagrams with proportional areas are
        provided, while UpSet plots are recommended for larger numbers
        of sets. The package supports GRanges and GRangesList inputs,
        and integrates with analysis workflows for ChIP-seq, ATAC-seq,
        and other genomic interval data. It generates clean,
        interpretable, and publication-ready figures.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
URL: https://github.com/ckntav/gVenn, https://ckntav.github.io/gVenn/
BugReports: https://github.com/ckntav/gVenn/issues
Suggests: testthat (>= 3.0.0), ggplot2, withr, knitr, rmarkdown
Config/testthat/edition: 3
Imports: ComplexHeatmap, eulerr, GenomicRanges, IRanges, lubridate,
        methods, rtracklayer, stringr, writexl
biocViews: Software, Visualization, ChIPSeq, ATACSeq, Epigenetics,
        DataRepresentation, Sequencing
VignetteBuilder: knitr
Depends: R (>= 4.4.0)
LazyData: false
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev perl zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 15:38:01 UTC
RemoteUrl: https://github.com/bioc/gVenn
RemoteRef: RELEASE_3_22
RemoteSha: 27b5dfc28e14d0bcbcc6c081dfc33029d84ff7da
NeedsCompilation: no
Packaged: 2025-11-11 19:28:59 UTC; root
Author: Christophe Tav [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-8808-9617>)
Maintainer: Christophe Tav <christophe.tav@gmail.com>
Built: R 4.5.2; ; 2025-11-12 03:15:21 UTC; windows
