############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf ClassifyR.buildbin-libdir && mkdir ClassifyR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=ClassifyR.buildbin-libdir ClassifyR_2.15.1.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'ClassifyR' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ClassifyR' finding HTML links ... done ClassifyResult-class html finding level-2 HTML links ... done DLDAinterface html DMDselection html EasyHardClassifier-class html FeatureSetCollection-class html FeatureSetCollectionOrNULL-class html KolmogorovSmirnovSelection html KullbackLeiblerSelection html MixModelsListsSet-class html NSCpredictInterface html NSCselectionInterface html NSCtrainInterface html PredictParams-class html ROCplot html ResubstituteParams-class html SVMinterface html SelectParams-class html SelectResult-class html TrainParams-class html TransformParams-class html asthmaDataset html bartlettSelection html calcPerformance html characterOrDataFrame-class html classifyInterface html differentMeansSelection html distribution html dlda-class html easyHardClassifier html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/meat/ClassifyR.buildbin-libdir/00LOCK-ClassifyR/00new/ClassifyR/help/easyHardClassifier.html easyHardFeatures html edgeRselection html edgesToHubNetworks html elasticNetFeatures html elasticNetGLMinterface html featureSetSummary html fisherDiscriminant html forestFeatures html functionOrList-class html functionOrNULL-class html getLocationsAndScales html integerOrNumeric-class html interactorDifferences html kTSPclassifier html knnInterface html leveneSelection html likelihoodRatioSelection html limmaSelection html listOrCharacterOrNULL-class html listOrNULL-class html mixmodels html multnet-class html naiveBayesKernel html networkCorrelationsSelection html pairsDifferencesSelection html pamrtrained-class html performancePlot html plotFeatureClasses html previousSelection html previousTrained html randomForest-class html randomForestInterface html rankingPlot html runTest html runTests html samplesMetricMap html selectionPlot html subtractFromLocation html svm-class html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'ClassifyR' as ClassifyR_2.15.1.zip * DONE (ClassifyR)