############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL singscore ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'singscore' ... ** using staged installation It is recommended to use 'given' instead of 'middle'. It is recommended to use 'given' instead of 'middle'. ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'singscore' finding HTML links ... done generateNull html generateNull_intl html getPvals html getStableGenes html multiScore html finding level-2 HTML links ... done plotDispersion html plotNull html plotRankDensity html plotRankDensity_intl html plotScoreLandscape html projectScoreLandscape html rankGenes html scoredf_ccle_epi html scoredf_ccle_mes html scoredf_tcga_epi html scoredf_tcga_mes html simpleScore html singscore html tgfb_expr_10_se html tgfb_gs_dn html tgfb_gs_up html toy_expr_se html toy_gs_dn html toy_gs_up html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (singscore) Making 'packages.html' ... done