############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data AlphaMissense.v2023.hg19 ### ############################################################################## ############################################################################## * checking for file ‘AlphaMissense.v2023.hg19/DESCRIPTION’ ... OK * preparing ‘AlphaMissense.v2023.hg19’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘AlphaMissense.v2023.hg19.Rmd’ using rmarkdown Quitting from AlphaMissense.v2023.hg19.Rmd:78-82 [retrieve3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! 25 resources failed to download --- Backtrace: ▆ 1. └─GenomicScores::getGScores("AlphaMissense.v2023.hg19", accept.license = TRUE) 2. ├─AnnotationHub::cache(ah[ahids]) 3. └─AnnotationHub::cache(ah[ahids]) 4. └─AnnotationHub (local) .local(x, ...) 5. ├─methods::callNextMethod(...) 6. │ └─base::eval(call, callEnv) 7. │ └─base::eval(call, callEnv) 8. └─AnnotationHub (local) .nextMethod(...) 9. └─AnnotationHub (local) .local(x, ...) 10. └─AnnotationHub:::.cache_internal(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'AlphaMissense.v2023.hg19.Rmd' failed with diagnostics: 25 resources failed to download --- failed re-building ‘AlphaMissense.v2023.hg19.Rmd’ SUMMARY: processing the following file failed: ‘AlphaMissense.v2023.hg19.Rmd’ Error: Vignette re-building failed. Execution halted