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BioC experimental data: CHECK report for HumanAffyData on moscato1

This page was generated on 2016-09-21 21:57:32 -0700 (Wed, 21 Sep 2016).

Package 149/304HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HumanAffyData 0.99.0
Brad Nelms
Snapshot Date: 2016-09-21 09:20:16 -0700 (Wed, 21 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/HumanAffyData
Last Changed Rev: 3861 / Revision: 3889
Last Changed Date: 2016-08-18 15:11:17 -0700 (Thu, 18 Aug 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  NotNeeded  OK [ OK ] OK 

Summary

Package: HumanAffyData
Version: 0.99.0
Command: rm -rf HumanAffyData.buildbin-libdir HumanAffyData.Rcheck && mkdir HumanAffyData.buildbin-libdir HumanAffyData.Rcheck && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=HumanAffyData.buildbin-libdir HumanAffyData_0.99.0.tar.gz >HumanAffyData.Rcheck\00install.out 2>&1 && cp HumanAffyData.Rcheck\00install.out HumanAffyData-install.out && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD check --library=HumanAffyData.buildbin-libdir --install="check:HumanAffyData-install.out" --force-multiarch --no-vignettes --timings HumanAffyData_0.99.0.tar.gz
StartedAt: 2016-09-21 14:36:38 -0700 (Wed, 21 Sep 2016)
EndedAt: 2016-09-21 14:38:59 -0700 (Wed, 21 Sep 2016)
EllapsedTime: 140.9 seconds
RetCode: 0
Status:  OK  
CheckDir: HumanAffyData.Rcheck
Warnings: 0

Command output

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###
### Running command:
###
###   rm -rf HumanAffyData.buildbin-libdir HumanAffyData.Rcheck && mkdir HumanAffyData.buildbin-libdir HumanAffyData.Rcheck && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=HumanAffyData.buildbin-libdir HumanAffyData_0.99.0.tar.gz >HumanAffyData.Rcheck\00install.out 2>&1 && cp HumanAffyData.Rcheck\00install.out HumanAffyData-install.out  && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD check --library=HumanAffyData.buildbin-libdir --install="check:HumanAffyData-install.out" --force-multiarch --no-vignettes --timings HumanAffyData_0.99.0.tar.gz
###
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* using log directory 'D:/biocbld/bbs-3.4-data-experiment/meat/HumanAffyData.Rcheck'
* using R version 3.3.1 (2016-06-21)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'HumanAffyData/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'HumanAffyData' version '0.99.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'HumanAffyData' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: OK

HumanAffyData.Rcheck/00install.out:


install for i386

* installing *source* package 'HumanAffyData' ...
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'HumanAffyData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'HumanAffyData' as HumanAffyData_0.99.0.zip
* DONE (HumanAffyData)

HumanAffyData.Rcheck/examples_i386/HumanAffyData-Ex.timings:

nameusersystemelapsed
HumanAffyData-package0.390.070.80

HumanAffyData.Rcheck/examples_x64/HumanAffyData-Ex.timings:

nameusersystemelapsed
HumanAffyData-package0.590.070.92