############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data EuPathDB ### ############################################################################## ############################################################################## * checking for file ‘EuPathDB/DESCRIPTION’ ... OK * preparing ‘EuPathDB’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘EuPathDB.Rmd’ using rmarkdown Quitting from EuPathDB.Rmd:112-115 [unnamed-chunk-4] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! AH65089 is an OrgDb resource. orgDb resources are generated for specific biocversions. Requested resource works with biocversion: 3.8 To find a resource appropriate for your biocversion try the following query: query(ah,'Leishmania major strain Friedlin genome wide annotations') --- Backtrace: ▆ 1. ├─res[["AH65089"]] 2. └─res[["AH65089"]] 3. └─AnnotationHub (local) .local(x, i, j = j, ...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'EuPathDB.Rmd' failed with diagnostics: AH65089 is an OrgDb resource. orgDb resources are generated for specific biocversions. Requested resource works with biocversion: 3.8 To find a resource appropriate for your biocversion try the following query: query(ah,'Leishmania major strain Friedlin genome wide annotations') --- failed re-building ‘EuPathDB.Rmd’ SUMMARY: processing the following file failed: ‘EuPathDB.Rmd’ Error: Vignette re-building failed. Execution halted