############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data variants ### ############################################################################## ############################################################################## * checking for file ‘variants/DESCRIPTION’ ... OK * preparing ‘variants’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘Annotating_Genomic_Variants.Rmd’ using rmarkdown Quitting from Annotating_Genomic_Variants.Rmd:132-134 [unnamed-chunk-9] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `keepSeqlevels()`: ! could not find function "keepSeqlevels" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Annotating_Genomic_Variants.Rmd' failed with diagnostics: could not find function "keepSeqlevels" --- failed re-building ‘Annotating_Genomic_Variants.Rmd’ SUMMARY: processing the following file failed: ‘Annotating_Genomic_Variants.Rmd’ Error: Vignette re-building failed. Execution halted