Category

Category Analysis

Bioconductor version: Development (2.8)

A collection of tools for performing category analysis.

Author: R. Gentleman with contributions from S. Falcon and D.Sarkar

Maintainer: Biocore Team c/o BioC user list

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("Category")    

Documentation

PDF	R Script	Using Categories to Analyze Microarray Data
PDF	R Script	Using Chromosome Bands as Categories

Reference Manual

Details

biocViews	Bioinformatics, Annotation, GO, Pathways
Depends	AnnotationDbi, Biobase
Imports	graph, methods, Biobase, AnnotationDbi, RBGL, GSEABase, genefilter, annotate, stats, utils
Suggests	EBarrays, ALL, Rgraphviz, RColorBrewer, xtable, hgu95av2.db, Matrix, KEGG.db, GO.db, SNPchip, geneplotter, limma, lattice, graph, Biobase, genefilter, methods
System Requirements
License	Artistic-2.0
URL
Depends On Me	GOstats, PCpheno, eisa
Imports Me	GOstats, PCpheno, cellHTS2, clusterProfiler, phenoTest, ppiStats
Suggests Me	BiocCaseStudies, GSEAlm, cellHTS, qpgraph
Version	2.17.2

Package Downloads

Package Source	Category_2.17.2.tar.gz
Windows Binary	Category_2.17.2.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	Category_2.17.2.tgz
Package Downloads Report	Download Stats