CHANGES IN VERSION 1.3.3
-------------------------

NEW FEATURES

   o STAR fusion import function: importFusionData

   o STAR run function: starInstallation

   o STAR installation function: starRun

   o BiocParallel supported functions:
     STAR import
     fusionName
     supportingReads
     filterList

CHANGES IN VERSION 1.3.9
-------------------------

NEW FEATURES

   o Rsubread aligner is used instead of tophat. 

CHANGES IN VERSION 1.3.12
--------------------------

NEW FEATURES

   o Picard-tools can be downloaded in chimara folder, picardInstallation.

   o The wrapper function validateSamFile uses picard tools to validate SAM/BAM files.

   o The wrapper function filterSamReads allows SAM and BAM filtering.

CHANGES IN VERSION 1.3.15
-------------------------

NEW FEATURES

   o GapFiller Nadalin et al BMC Bioinformatics was implemented as de novo validation tool for fusion break point.