To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BCRANK")

In most cases, you don't need to download the package archive at all.

BCRANK

This package is for version 2.14 of Bioconductor; for the stable, up-to-date release version, see BCRANK.

Predicting binding site consensus from ranked DNA sequences

Bioconductor version: 2.14

Functions and classes for de novo prediction of transcription factor binding consensus by heuristic search

Author: Adam Ameur <Adam.Ameur at genpat.uu.se>

Maintainer: Adam Ameur <Adam.Ameur at genpat.uu.se>

Citation (from within R, enter citation("BCRANK")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BCRANK")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BCRANK")

PDF	R Script	BCRANK
PDF		Reference Manual

biocViews	GeneRegulation, MotifDiscovery, Software
Version	1.26.0
In Bioconductor since	BioC 2.2 (R-2.7) (8 years)
License	GPL-2
Depends	methods
Imports	Biostrings
LinkingTo
Suggests	seqLogo
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	BCRANK_1.26.0.tar.gz
Windows Binary	BCRANK_1.26.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	BCRANK_1.26.0.tgz
Mac OS X 10.9 (Mavericks)	BCRANK_1.26.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/BCRANK/tree/release-2.14
Package Short Url	http://bioconductor.org/packages/BCRANK/
Package Downloads Report	Download Stats

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