To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("gaucho")

In most cases, you don't need to download the package archive at all.

gaucho

This package is for version 2.14 of Bioconductor; for the stable, up-to-date release version, see gaucho.

Genetic Algorithms for Understanding Clonal Heterogeneity and Ordering

Bioconductor version: 2.14

Use genetic algorithms to determine the relationship between clones in heterogenous populations such as cancer sequencing samples

Author: Alex Murison [aut, cre], Christopher Wardell [aut, cre]

Maintainer: Alex Murison <Alexander.Murison at icr.ac.uk>, Christopher Wardell <Christopher.Wardell at icr.ac.uk>

Citation (from within R, enter citation("gaucho")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("gaucho")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("gaucho")

biocViews	Genetics, SNP, Sequencing, Software, SomaticMutation
Version	1.0.0
In Bioconductor since	BioC 2.14 (R-3.1) (2 years)
License	GPL-3
Depends	R (>= 3.0.0), compiler, GA, graph, heatmap.plus, png, Rgraphviz
Imports
LinkingTo
Suggests	knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	gaucho_1.0.0.tar.gz
Windows Binary	gaucho_1.0.0.zip
Mac OS X 10.6 (Snow Leopard)	gaucho_1.0.0.tgz
Mac OS X 10.9 (Mavericks)	gaucho_1.0.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/gaucho/tree/release-2.14
Package Short Url	http://bioconductor.org/packages/gaucho/
Package Downloads Report	Download Stats

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