To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("nucleR")
In most cases, you don't need to download the package archive at all.
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This package is for version 2.14 of Bioconductor; for the stable, up-to-date release version, see nucleR.
Bioconductor version: 2.14
Nucleosome positioning for Tiling Arrays and Next Generation Sequencing Experiments
Author: Oscar Flores, David Rossell
Maintainer: Oscar Flores <oflores at mmb.pcb.ub.es>
Citation (from within R,
enter citation("nucleR")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("nucleR")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("nucleR")
R Script | Quick analysis of nucleosome positioning experiments | |
Reference Manual | ||
Text | NEWS |
biocViews | ChIPSeq, Genetics, Microarray, Sequencing, Software |
Version | 1.12.0 |
In Bioconductor since | BioC 2.9 (R-2.14) (4.5 years) |
License | LGPL (>= 3) |
Depends | methods, BiocGenerics(>= 0.1.0), IRanges(>= 1.13.5), Biobase(>= 2.15.1), ShortRead, parallel |
Imports | methods, BiocGenerics, IRanges, Biobase, ShortRead, GenomicRanges, stats |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | htSeqTools |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | nucleR_1.12.0.tar.gz |
Windows Binary | nucleR_1.12.0.zip |
Mac OS X 10.6 (Snow Leopard) | nucleR_1.12.0.tgz |
Mac OS X 10.9 (Mavericks) | nucleR_1.12.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/nucleR/tree/release-2.14 |
Package Short Url | http://bioconductor.org/packages/nucleR/ |
Package Downloads Report | Download Stats |
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