- Home
- Bioconductor 2.6
- Software Packages
- DNAcopy
DNAcopy
DNA copy number data analysis
Bioconductor version: 2.6
Segments DNA copy number data using circular binary segmentation to detect regions with abnormal copy number
Author: Venkatraman E. Seshan, Adam Olshen
Maintainer: Venkatraman E. Seshan <seshanv at mskcc.org>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("DNAcopy")
To cite this package in a publication, start R and enter:
citation("DNAcopy")
Documentation
| R Script | DNAcopy | |
| Reference Manual |
Details
| biocViews | Microarray, CopyNumberVariants |
| Depends | |
| Imports | |
| Suggests | |
| System Requirements | |
| License | GPL (>= 2) |
| URL | |
| Depends On Me | CGHcall, cghMCR, snapCGH |
| Imports Me | snapCGH |
| Suggests Me | beadarraySNP |
| Version | 1.22.1 |
| Since | Bioconductor 1.6 (R-2.1) or earlier |
Package Downloads
| Package Source | DNAcopy_1.22.1.tar.gz |
| Windows Binary | DNAcopy_1.22.1.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | DNAcopy_1.22.1.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!
Contact us: webmaster@bioconductor.org
Hosting provided by Fred Hutchinson Cancer Research Center
Copyright © 2003 - 2012
