Package: scds
Type: Package
Title: In-Silico Annotation of Doublets for Single Cell RNA Sequencing
        Data
Version: 1.27.0
Authors@R: c(person("Dennis", "Kostka", role=c("aut", "cre"),
        email="kostka@pitt.edu"), person("Bais", "Abha",
        role=c("aut"), email="abhabais@pitt.edu"))
Description: In single cell RNA sequencing (scRNA-seq) data
        combinations of cells are sometimes considered a single cell
        (doublets). The scds package provides methods to annotate
        doublets in scRNA-seq data computationally.
License: MIT + file LICENSE
Encoding: UTF-8
biocViews: SingleCell, RNASeq, QualityControl, Preprocessing,
        Transcriptomics, GeneExpression, Sequencing, Software,
        Classification
RoxygenNote: 6.1.1
Depends: R (>= 3.6.0)
Imports: Matrix, S4Vectors, SingleCellExperiment, SummarizedExperiment,
        xgboost, methods, stats, dplyr, pROC
Suggests: BiocStyle, knitr, rsvd, Rtsne, scater, cowplot, rmarkdown
VignetteBuilder: knitr
Config/pak/sysreqs: make zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:50:18 UTC
RemoteUrl: https://github.com/bioc/scds
RemoteRef: HEAD
RemoteSha: e3ed254cc61b87a8bd3174fa93962ef7ff6142dd
NeedsCompilation: no
Packaged: 2025-10-30 10:30:09 UTC; root
Author: Dennis Kostka [aut, cre],
  Bais Abha [aut]
Maintainer: Dennis Kostka <kostka@pitt.edu>
Built: R 4.6.0; ; 2025-10-30 10:32:38 UTC; windows
