c3bde156c0761d9578badd79a0161031 *CITATION
08154b68240efa11cb27cb4fd2d7a4b8 *DESCRIPTION
79c58e2ad89d35e1a68916a9d5ba0b79 *INDEX
f79c5d98120f504616ea0247374d0aee *Meta/Rd.rds
d4215bb1d32d8dea6bc4f85678f2e033 *Meta/data.rds
97f39cfa069205fc947ab1e51ea53d4e *Meta/features.rds
1c97dd42a0811d4d0a20e573b60aa34b *Meta/hsearch.rds
de5cbe576eeb62a6de25a4219948995b *Meta/links.rds
4bd23315db91ee1506080b07c0f03152 *Meta/nsInfo.rds
d89c5a80b86fffbae3505856eb4a9ee1 *Meta/package.rds
0790b25bedefc0d0724f34aa80d7970b *Meta/vignette.rds
6621d5f58a1e621e537098fb6d553ebb *NAMESPACE
a0fddb94813c5ed2c6f607d24b436efd *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/SGSeq
3263dc2f9b1e2bd7fc610a3d95327cff *R/SGSeq.rdb
c1e0bf7316b2986cf4a04b2df7674775 *R/SGSeq.rdx
b7c5a38657488c3170e1fb363863c220 *data/Rdata.rdb
d787cf87c512c93fdd1f41c863eed233 *data/Rdata.rds
6e6309fd4ec67c05eae2daf3c3412cda *data/Rdata.rdx
117be5e396bae15feb07154b8663bae6 *doc/SGSeq.R
a1bedcc062dbe7d53c768689aa8c88eb *doc/SGSeq.Rmd
610617f23920d5ada117c48db1cd8843 *doc/SGSeq.html
9f286d5adabf25aab479a366c45a0d28 *doc/index.html
f635a290f6dd7bd6a571a748b9b4ce2d *extdata/bams/N1.bam
10e437ecd83a1648f6feb28efd666a3d *extdata/bams/N1.bam.bai
6ae387d023817532da8ab3273731c6b7 *extdata/bams/N2.bam
7bc7623be9eb5b52f7d272b1e54d7c1f *extdata/bams/N2.bam.bai
e07e5bf79859b2028cb402c079577316 *extdata/bams/N3.bam
20cd985ef7ffa218da184f187ce50dea *extdata/bams/N3.bam.bai
b0a8a2796e4cd67d1c5231481dc298f7 *extdata/bams/N4.bam
c14641aca82d7b303f9ab448ce5b4f2e *extdata/bams/N4.bam.bai
dab9dc6d74c1e618b960baa0148740af *extdata/bams/T1.bam
f1bd4bdf90f83ca520ab1fba63cea726 *extdata/bams/T1.bam.bai
6e43c101708a4040937e389b9888832b *extdata/bams/T2.bam
b48cfbe384de76d521dff37845bb811b *extdata/bams/T2.bam.bai
1751240dde82ab77847b18cc93ce4b31 *extdata/bams/T3.bam
b0c6a086071d7f7d5c5153cfc1778147 *extdata/bams/T3.bam.bai
0ed841f711101c6ed48133d5cf35c9df *extdata/bams/T4.bam
33e452914d0a92a7287b5902f7a223d3 *extdata/bams/T4.bam.bai
7d31b555fc3a0ef493db24637a69d7b5 *help/AnIndex
8240bef6c89ba0caeb7cced74fda079d *help/SGSeq.rdb
b1c5359070ef863b6a8662fb43aa1c53 *help/SGSeq.rdx
75b703a7fe0af7ab3975c08900159493 *help/aliases.rds
88b2c9a1a042a400fb75927902121223 *help/paths.rds
f850fdc01c1c3fa5bbc2571e1ba1a62f *html/00Index.html
8b9362669af13540a86a3ac6cf22f99d *html/R.css
aa1cd7d5f49fc7a5ee7e2721a4654b39 *scripts/createExampleData.R
62e6eb32b9d91e2d2e22f8a0ebe3999b *unitTests/test_analyzeFeatures.R
41062843ebebbec77ddf6fbc1eebe14b *unitTests/test_analyzeVariants.R
1a72ecb53227d3f1a1b3ea90297e911f *unitTests/test_annotate.R
445456f7b917f405ff4ffa9c6f0c305a *unitTests/test_classes.R
fca7f739cb7036e0480477929e575cad *unitTests/test_convertToSGFeatures.R
008fcf1ee84836bd7c707d4e91053124 *unitTests/test_convertToTxFeatures.R
a3b06c1e5dab349b9a3fbacb6ade7563 *unitTests/test_findSGVariants.R
018d012a9bc57431328f9574ad429925 *unitTests/test_getBamInfo.R
49e19e07becae41efb382ed9f01719b2 *unitTests/test_getSGFeatureCounts.R
66d59bb78d566b15751680e3d3fa1c1d *unitTests/test_getSGVariantCounts.R
82ac16fa44fac098647f31ac89dfa696 *unitTests/test_mergeTxFeatures.R
9212fb3c627df1a8f0db8e52fa7b5da2 *unitTests/test_predictTxFeatures.R
e30149b56b868d0e555485ef0607eafb *unitTests/test_predictVariantEffects.R
