9d30b74ccda0771a97044eb0dd05191c *DESCRIPTION
8bd6afcf8e152dc9999d9066707cc81a *INDEX
8524b2deab02f6c5f1a346787f22e286 *Meta/Rd.rds
7bcf65b1158199df4afae2b1d38a8ffe *Meta/data.rds
41622305d1b139d0fa70aaba76dca134 *Meta/features.rds
c439988a81e578d36324ae2c5b21fdf8 *Meta/hsearch.rds
ee5698256f22bdf8559fbb1e6a73be48 *Meta/links.rds
e00580b1a8434e02cfe80c07d8e092ec *Meta/nsInfo.rds
91fd663b37594e086ed264e54c9ad46d *Meta/package.rds
1d70126a272e31c9ef8d425d578833ac *Meta/vignette.rds
f2a560657232b2afbdce094b763648da *NAMESPACE
302eb74005d4628313dd72f235ada0c6 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/VariantTools
d98c8a57879abe3dbd4abe133d1a99c4 *R/VariantTools.rdb
05bb5d894368e5cc4645a6ac37968ca8 *R/VariantTools.rdx
1694b3c9f73c5d2c12b3f98460ce4928 *data/vignette.rda
8d5ddf1aee747bfe9f75ad0ffc3f13e3 *doc/VariantTools.R
b7f9d4a21e2fe40fe4373ba070ec12c4 *doc/VariantTools.Rnw
00231a76820b209338b42f55c8e04f81 *doc/VariantTools.pdf
e502007f6e906fa8467344cec2f4e1b6 *doc/fig/VariantCallingProcess.pdf
e6a9a9d24613ddbf590543bc5ebeac0d *doc/fig/bar-caller-freq-summary-dbSNP-count-all.pdf
0ea34819326314eae4c6b9d5f4ee9dbe *doc/fig/bar-fdr-cov-bin-merged-all.pdf
1c91bbadcef2b6cba06c5d9b328ba192 *doc/fig/bar-fnr-cov-bin-merged-all.pdf
380b2a619aefe23bd017320b0f05540f *doc/fig/boxplot-altFraction.pdf
34a468a845bb92d33e20533d70da349b *doc/fig/boxplot-expected-obs-freq-source-merged-vt.pdf
dc08e35af067169253e263d844fbc13f *doc/fig/boxplot-obs-freq-sample-ceu-all.pdf
a6d1a91d902b823ea49e3533087adc3a *doc/fig/density-altFraction.pdf
9081576fb3392c333fa126ad4557c53a *doc/fig/dot-percent-recovered-caller-merged-20-all.pdf
31b854f38096fba1546ecf0124be1101 *doc/fig/errors.pdf
ff7f4e378ea15116c447180c721ed35c *doc/fig/hist-fdr-rep-count-all.pdf
cafe8bda6b95fb9dd48a1f3dcd14fca3 *doc/fig/igv_high_cov_neg.png
72c5d2679455c4913dfc6c684c2839e2 *doc/fig/mix.pdf
5192ba8e79d29bf7c9f7f2008dd7aa98 *doc/fig/post-filters.pdf
c81e6de4687156b4883bdefed5c79edb *doc/fig/variant-calling-filters.pdf
8360dff4ce73e85ebe879d662a8da062 *doc/fig/workflow.pdf
1de9e30bbfa230b7b4c011a984ba139a *doc/index.html
04f3442396ed48d6be465606e784d7ca *doc/tutorial.org
e18d1dc09c30c968212c5bef7d5dd6da *doc/tutorial.pdf
e372e3b655282fec0a7ca5f149509595 *help/AnIndex
c5b5921fe6ce5033ddad1f0f9d7256cf *help/VariantTools.rdb
c5ad7a0637d995e315a1f5936cf2481e *help/VariantTools.rdx
b59eb0cbac8e49fcf7955da5fc8ed965 *help/aliases.rds
fdb1fee74dbac0d125b2ae80564cc015 *help/paths.rds
f8f5374a8d5440a788aead7e4f8fb756 *html/00Index.html
8b9362669af13540a86a3ac6cf22f99d *html/R.css
2c4749f07b3615e481b4df89ca88d34d *unitTests/test_calculateConcordanceMatrix.R
2ff6eb94487808d81e15a164c69023f1 *unitTests/test_idVerify.R
cfc6d0f068fbd1c0cf8017e5aae89743 *unitTests/test_variantConcordance.R
a43c2278392bc452656836bbd0ceafae *vcf/header.csv
