memes-package	memes-package
add_sequence	add_sequence
ame_compare_heatmap_methods	ame_compare_heatmap_methods
check_meme_install	check_meme_install
drop_best_match	drop_best_match
example_ame	example_ame
example_ame_large	example_ame_large
example_chip_summits	example_chip_summits
example_dreme	example_dreme
example_dreme_by_binding	example_dreme_by_binding
example_dreme_tomtom	example_dreme_tomtom
example_fimo	example_fimo
example_peaks	example_peaks
example_rnaseq	example_rnaseq
example_tomtom	example_tomtom
force_best_match	force_best_match
get_sequence	get_sequence
has_duplicate_motifs	has_duplicate_motifs
importAme	importAme
importDremeXML	importDremeXML
importFimo	importFimo
importMeme	importMeme
importStremeXML	importStremeXML
importTomTomXML	importTomTomXML
memes	memes-package
meme_is_installed	meme_is_installed
nest_tomtom	nest_tomtom
plot_ame_heatmap	plot_ame_heatmap
plot_sequence_heatmap	plot_sequence_heatmap
remove_duplicate_motifs	remove_duplicate_motifs
runAme	runAme
runAme.BStringSetList	runAme
runAme.default	runAme
runAme.list	runAme
runDreme	runDreme
runFimo	runFimo
runMeme	runMeme
runMeme.BStringSetList	runMeme
runMeme.default	runMeme
runMeme.list	runMeme
runStreme	runStreme
runTomTom	runTomTom
update_best_match	update_best_match
view_tomtom_hits	view_tomtom_hits
write_fasta	write_fasta
