8c8d39b5da4283ed9ec73b1f7b15f3e4 *CITATION
45cdefe0090fbda867dedf99c229cef9 *DESCRIPTION
16ff8adea6a757532e39de215c146875 *INDEX
fa33a58c9ccda13b27dcd5d2ccc71739 *Meta/Rd.rds
aedd6b6a11710f13697a412d20f30c10 *Meta/data.rds
97f39cfa069205fc947ab1e51ea53d4e *Meta/features.rds
a6f0cef8fffbe44dbd4ed37bc500cdd7 *Meta/hsearch.rds
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5e60b8d9c23aae058e46d53e9a00afaa *Meta/nsInfo.rds
9713b3dcdd1143b3e59b03c13d051dcf *Meta/package.rds
4bb65ec51347ba3493a05ab21a7e6da3 *Meta/vignette.rds
c408b212b062c6e44edb37f48789c8de *NAMESPACE
2e85eb1ff18dc4e3fbabda0e438f31be *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/mitoClone2
7743541987da0b4e96c53795a22237e6 *R/mitoClone2.rdb
8d181e3d6067902ca4c93925d6e35c76 *R/mitoClone2.rdx
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da07882fccdbb994f520eae67243d793 *R/sysdata.rdx
cdbc483a57737df5c1e9e10014b15ffd *SCITE/scite.exe
1c453e7d35264b67e77f4cfbfb1dccb2 *SCITEpkg/README.md
441da25a084dc0251f1c71675052160a *SCITEpkg/findBestTrees.cpp
24cc744163f05f56eb5c056754e016e2 *SCITEpkg/matrices.cpp
0c30d07b4f2f505c9f2873296b68b464 *SCITEpkg/matrices.h
d9d3175fc3bcac7e74b8a775d72605be *SCITEpkg/mcmc.cpp
9722937e05c7a47bb4fc035113ec7e00 *SCITEpkg/mcmc.h
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187a3dc0b50d8d6d69a5798c8dad9a38 *SCITEpkg/mcmcTreeMove.cpp
02bfa00af6681e80acdd0d9e8d6a5997 *SCITEpkg/mcmcTreeMove.h
7da0281fff2e656e2fd1a97190877954 *SCITEpkg/output.cpp
2a487f9f13aacf18a6c10d5a68636348 *SCITEpkg/output.h
dae220a9427605c41d829adff55626a5 *SCITEpkg/rand.cpp
f7977efec0569ea7072ebd94edf710b8 *SCITEpkg/rand.h
274d3abd011a24aeae0f02838342c4e0 *SCITEpkg/scoreBinTree.cpp
d5c0fd453c381819d746d04a2e2728b4 *SCITEpkg/scoreBinTree.h
ab9d37be1f979babcc809c9c0017ab0f *SCITEpkg/scoreTree.cpp
6be789db89746497db22d86d1c1bd594 *SCITEpkg/scoreTree.h
fb3efad6b02e95889357e3903575c4b3 *SCITEpkg/treelist.cpp
6e55d843ff04d914068c3141c06268b4 *SCITEpkg/treelist.h
b0002b1dbf2f2e07e8fa19de18900a35 *SCITEpkg/trees.cpp
60d016269ce68fdccdd1b3e41e702717 *SCITEpkg/trees.h
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2ab3339a8be7a48ab1c39b147938b62e *data/M_P2.RData
47bc44afea9033a4ff5537ea6cdcbc70 *data/N_P1.RData
ca5a52c762e93455122542fb0812e45f *data/N_P2.RData
6720b2f8ef7fd3d35b3bb1d77dbc237e *doc/clustering.R
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4d70a5c391c1f07da730c056fc618aa4 *doc/clustering.html
411244285bca8a9c87788b6ed1b3536a *doc/index.html
21b34c7261c1e7cbbc15e7b65e4596a5 *doc/overview.R
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29309a44ca1933f79ff6b197c3b677e6 *extdata/LudwigFig7.Rda
b8d2e5034b419ff6463937846aa1340b *extdata/example_counts.Rda
08e89c9f01505ff6184a275e21b6ca1c *extdata/mm10_10x.bam
15c920cc46edc7d2f16b609e7db26a48 *extdata/mm10_10x.bam.bai
583c9140a54366ac9120090fa8c0667f *extdata/sample_example1.RDS
27bd2d51a3b6ed0a814f21c3c3e52515 *help/AnIndex
73de270a7f68c84ddc24534dc5b5b631 *help/aliases.rds
2677d635d9e1b8086bdb5c34bf4beb56 *help/figures/logo.png
a0d2a0c39f331332cf1ba1d1fc4f7da1 *help/mitoClone2.rdb
d3f075485a8b143d38159e00b3ce3110 *help/mitoClone2.rdx
8905df9282c5f70aba94e653591ea866 *help/paths.rds
978b72fdc08b44dbf3f31478caaa5c3f *html/00Index.html
8b9362669af13540a86a3ac6cf22f99d *html/R.css
9f1a5052e141cc851cf6fdf3d2547c75 *libs/x64/mitoClone2.dll
e99b3cf183e3d2a72c813c2b639ea583 *script/README
