rSWeeP-package	rSWeeP-package
extractHDV	extractHDV
extractHDV,AAStringSet-method	extractHDV
extractHDV,BString-method	extractHDV
extractHDV,BStringSet-method	extractHDV
extractHDV,character-method	extractHDV
extractHDV,DNAStringSet-method	extractHDV
extractHDV,RNAStringSet-method	extractHDV
orthBase	orthBase
PCCI	PCCI
PMPG	PMPG
rSWeeP	rSWeeP-package
SWeeP	SWeeP
SWeeP,AAStringSet-method	SWeeP
SWeeP,array-method	SWeeP
SWeeP,BString-method	SWeeP
SWeeP,BStringSet-method	SWeeP
SWeeP,character-method	SWeeP
SWeeP,dgCMatrix-method	SWeeP
SWeeP,DNAStringSet-method	SWeeP
SWeeP,integer-method	SWeeP
SWeeP,matrix-method	SWeeP
SWeeP,RNAStringSet-method	SWeeP
SWeePlite	SWeePlite
SWeePlite,AAStringSet-method	SWeePlite
SWeePlite,array-method	SWeePlite
SWeePlite,BString-method	SWeePlite
SWeePlite,BStringSet-method	SWeePlite
SWeePlite,character-method	SWeePlite
SWeePlite,dgCMatrix-method	SWeePlite
SWeePlite,DNAStringSet-method	SWeePlite
SWeePlite,integer-method	SWeePlite
SWeePlite,matrix-method	SWeePlite
SWeePlite,RNAStringSet-method	SWeePlite
