Last updated on 2026-03-02 09:52:05 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 4.13 | 50.63 | 54.76 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 3.01 | 37.50 | 40.51 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 80.45 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 88.22 | OK | |||
| r-devel-macos-arm64 | 0.1.0 | 1.00 | 22.00 | 23.00 | ERROR | |
| r-devel-windows-x86_64 | 0.1.0 | 7.00 | 68.00 | 75.00 | ERROR | |
| r-patched-linux-x86_64 | 0.1.0 | 4.52 | 44.31 | 48.83 | OK | |
| r-release-linux-x86_64 | 0.1.0 | 3.77 | 44.24 | 48.01 | OK | |
| r-release-macos-arm64 | 0.1.0 | 1.00 | 22.00 | 23.00 | ERROR | |
| r-release-macos-x86_64 | 0.1.0 | 3.00 | 61.00 | 64.00 | ERROR | |
| r-release-windows-x86_64 | 0.1.0 | 7.00 | 68.00 | 75.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.1.0 | 1.00 | 26.00 | 27.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.1.0 | 3.00 | 111.00 | 114.00 | ERROR | |
| r-oldrel-windows-x86_64 | 0.1.0 | 9.00 | 80.00 | 89.00 | ERROR |
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [1s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
Saving _problems/test_search_ncbi_clinvar-31.R
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 62 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.6"
`expected`: "100.1"
── Error ('test_search_ncbi_clinvar.R:31:3'): search_ncbi_clinvar correctly retrieves pathogenicity information ──
<subscriptOutOfBoundsError/error/condition>
Error in `ans[[1]]`: subscript out of bounds
Backtrace:
▆
1. └─ORscraper::search_ncbi_clinvar(...) at test_search_ncbi_clinvar.R:31:3
2. └─rentrez::entrez_search(db = "clinvar", term = gene_query)
3. ├─rentrez:::parse_esearch(parsed, history = use_history)
4. └─rentrez:::parse_esearch.XMLInternalDocument(parsed, history = use_history)
5. ├─XML::xmlValue(x[["/eSearchResult/Count"]])
6. ├─x[["/eSearchResult/Count"]]
7. └─XML:::`[[.XMLInternalDocument`(x, "/eSearchResult/Count")
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 62 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-macos-arm64
Version: 0.1.0
Check: tests
Result: ERROR
Running 'spelling.R' [0s]
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.6"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [1s/4s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.5"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-arm64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [2s/6s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.5"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running 'spelling.R' [0s]
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.5"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [1s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.4"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [2s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.4"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running 'spelling.R' [0s]
Running 'testthat.R' [6s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.4"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64