CRAN Package Check Results for Package fioRa

Last updated on 2026-01-24 10:48:41 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.4 4.13 54.59 58.72 OK
r-devel-linux-x86_64-debian-gcc 0.3.4 OK
r-devel-linux-x86_64-fedora-clang 0.3.7 7.00 135.77 142.77 OK
r-devel-linux-x86_64-fedora-gcc 0.3.7 147.66 OK
r-devel-windows-x86_64 0.3.7 6.00 108.00 114.00 OK
r-patched-linux-x86_64 0.3.4 3.72 51.02 54.74 OK
r-release-linux-x86_64 0.3.4 4.04 50.69 54.73 OK
r-release-macos-arm64 0.3.7 1.00 27.00 28.00 OK
r-release-macos-x86_64 0.3.7 3.00 91.00 94.00 ERROR
r-release-windows-x86_64 0.3.4 7.00 70.00 77.00 OK
r-oldrel-macos-arm64 0.3.7 1.00 53.00 54.00 ERROR
r-oldrel-macos-x86_64 0.3.7 3.00 96.00 99.00 OK
r-oldrel-windows-x86_64 0.3.4 8.00 86.00 94.00 OK

Check Details

Version: 0.3.7
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [30s/44s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(fioRa) > > testthat::test_check("fioRa") Saving _problems/test-fct_read_fiora-43.R Loading required package: shiny [ FAIL 1 | WARN 0 | SKIP 5 | PASS 45 ] ══ Skipped tests (5) ═══════════════════════════════════════════════════════════ • On CRAN (5): 'test-app_utils.R:40:1', 'test-app_utils.R:66:1', 'test-find_fiora_predict_paths.R:2:3', 'test-run_script.R:3:3', 'test-run_script.R:18:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-fct_read_fiora.R:43:3'): fioRa can read the standard fiora example annotated output mgf as Spectra format ── Error in `verify_suggested(pkg = c("S4Vectors", "Spectra"))`: The use of this function requires package Spectra. Please install. Backtrace: ▆ 1. └─fioRa::read_fiora(fl = fl, fmt = "Spectra") at test-fct_read_fiora.R:43:3 2. └─fioRa:::convert2Spectra(out) 3. └─fioRa:::verify_suggested(pkg = c("S4Vectors", "Spectra")) [ FAIL 1 | WARN 0 | SKIP 5 | PASS 45 ] Error: ! Test failures. Execution halted Flavor: r-release-macos-x86_64

Version: 0.3.7
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘Spectra’ Flavor: r-oldrel-macos-arm64

Version: 0.3.7
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [11s/24s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(fioRa) > > testthat::test_check("fioRa") 2026-01-24 20:55:33.258 R[91777:279009] XType: Using static font registry. Saving _problems/test-fct_read_fiora-43.R Loading required package: shiny [ FAIL 1 | WARN 0 | SKIP 5 | PASS 45 ] ══ Skipped tests (5) ═══════════════════════════════════════════════════════════ • On CRAN (5): 'test-app_utils.R:40:1', 'test-app_utils.R:66:1', 'test-find_fiora_predict_paths.R:2:3', 'test-run_script.R:3:3', 'test-run_script.R:18:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-fct_read_fiora.R:43:3'): fioRa can read the standard fiora example annotated output mgf as Spectra format ── Error in `verify_suggested(pkg = c("S4Vectors", "Spectra"))`: The use of this function requires package Spectra. Please install. Backtrace: ▆ 1. └─fioRa::read_fiora(fl = fl, fmt = "Spectra") at test-fct_read_fiora.R:43:3 2. └─fioRa:::convert2Spectra(out) 3. └─fioRa:::verify_suggested(pkg = c("S4Vectors", "Spectra")) [ FAIL 1 | WARN 0 | SKIP 5 | PASS 45 ] Error: ! Test failures. Downloading uv...Done! Downloading cpython-3.12.12-macos-aarch64-none (download) (16.8MiB) Downloaded cpython-3.12.12-macos-aarch64-none (download) Downloading numpy (11.8MiB) Downloaded numpy Installed 1 package in 9ms Execution halted Flavor: r-oldrel-macos-arm64