gsEasy 1.3
- Fixed bug, now ensuring absolute value of correlation parameter
ris used to compute enrichment score (credit to Michael
from Berkeley).
gsEasy 1.1
- Now includes GO term gene sets data object (i.e. a listofcharactervectors, named by GO term, of genes associated
with each term - can be loaded withdata(GO_gene_sets)[based on Gene Ontology (2015-11-27) and human GO annotations file
validated on 07/08/2016]).
- Change in how Sargument ofgsetis
interpreted when vector of scoresris supplied - now
instead of the scores forSbeing those at the
corresponding ranks inr, they are those at corresponding
indices. For example, in version 1.0 the scores forS=1:3would be the top 3 scores inr, however now it be the those
of the first 3 elements ofr. Behaviour has not changed for
whenSischaracteror whenNis
used instead ofr.