o2plsda: Multiomics Data Integration
Provides functions to do 'O2PLS-DA' analysis for multiple omics data integration.
The algorithm came from "O2-PLS, a two-block (X±Y) latent variable regression (LVR) method with an integral OSC filter"
which published by Johan Trygg and Svante Wold at 2003 <doi:10.1002/cem.775>.
'O2PLS' is a bidirectional multivariate regression method that aims to separate the covariance between
two data sets (it was recently extended to multiple data sets) (Löfstedt and Trygg, 2011 <doi:10.1002/cem.1388>; Löfstedt et al., 2012 <doi:10.1016/j.aca.2013.06.026>)
from the systematic sources of variance being specific for each data set separately.
| Version: |
0.0.25 |
| Imports: |
Rcpp (≥ 1.0.7), dplyr, magrittr, parallel, ggplot2, ggrepel, methods, stats |
| LinkingTo: |
Rcpp, RcppArmadillo |
| Suggests: |
knitr, markdown, rmarkdown |
| Published: |
2024-07-18 |
| DOI: |
10.32614/CRAN.package.o2plsda |
| Author: |
Kai Guo [aut, cre],
Junguk Hur [aut],
Eva Feldman [aut] |
| Maintainer: |
Kai Guo <guokai8 at gmail.com> |
| License: |
GPL-3 |
| NeedsCompilation: |
yes |
| Materials: |
README |
| In views: |
Omics |
| CRAN checks: |
o2plsda results [issues need fixing before 2025-10-31] |
Documentation:
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