optimos.prime: Optimos Prime Helps Calculate Autoecological Data for Biological Species

Calculates autoecological data (optima and tolerance ranges) of a biological species given an environmental matrix. The package calculates by weighted averaging, using the number of occurrences to adjust the tolerance assigned to each taxon to estimate optima and tolerance range in cases where taxa have unequal occurrences. See the detailed methodology by Birks et al. (1990) <doi:10.1098/rstb.1990.0062>, and a case example by Potapova and Charles (2003) <doi:10.1046/j.1365-2427.2003.01080.x>.

Version: 0.1.2
Depends: ggplot2, tidyverse, plotly
Published: 2020-01-29
DOI: 10.32614/CRAN.package.optimos.prime
Author: María Belén Sathicq [aut], María Mercedes Nicolosi Gelis [aut], Joaquín Cochero [cre]
Maintainer: Joaquín Cochero <jcochero at ilpla.edu.ar>
License: GPL-2 | GPL-3 [expanded from: GNU General Public License]
NeedsCompilation: no
CRAN checks: optimos.prime results

Documentation:

Reference manual: optimos.prime.html , optimos.prime.pdf

Downloads:

Package source: optimos.prime_0.1.2.tar.gz
Windows binaries: r-devel: optimos.prime_0.1.2.zip, r-release: optimos.prime_0.1.2.zip, r-oldrel: optimos.prime_0.1.2.zip
macOS binaries: r-release (arm64): optimos.prime_0.1.2.tgz, r-oldrel (arm64): optimos.prime_0.1.2.tgz, r-release (x86_64): optimos.prime_0.1.2.tgz, r-oldrel (x86_64): optimos.prime_0.1.2.tgz
Old sources: optimos.prime archive

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