For biparental, three and four-way crosses Identity by Descent
(IBD) probabilities can be calculated using Hidden Markov Models and
inheritance vectors following Lander and Green
(<https://www.jstor.org/stable/29713>) and Huang
(<doi:10.1073/pnas.1100465108>). One of a series of statistical genetic
packages for streamlining the analysis of typical plant breeding experiments
developed by Biometris.
| Version: |
1.0.9 |
| Depends: |
R (≥ 3.6) |
| Imports: |
data.table, ggplot2, Matrix, R.utils, rlang, Rcpp, statgenGWAS (≥ 1.0.9), stringi |
| LinkingTo: |
Rcpp, RcppArmadillo |
| Suggests: |
rmarkdown, knitr, tinytest |
| Published: |
2025-07-01 |
| DOI: |
10.32614/CRAN.package.statgenIBD |
| Author: |
Martin Boer  [aut],
Bart-Jan van Rossum
[aut, cre],
Wenhao Li [ctb],
Johannes Kruisselbrink
[ctb] |
| Maintainer: |
Bart-Jan van Rossum <bart-jan.vanrossum at wur.nl> |
| BugReports: |
https://github.com/Biometris/statgenIBD/issues |
| License: |
GPL-2 | GPL-3 [expanded from: GPL] |
| URL: |
https://biometris.github.io/statgenIBD/index.html,
https://github.com/Biometris/statgenIBD/ |
| NeedsCompilation: |
yes |
| Materials: |
README, NEWS |
| In views: |
Agriculture |
| CRAN checks: |
statgenIBD results |