mrcImageCTFObservation

Usage

Usage: mrcImageCTFObservation
Options:
    [-i[nput]            In                  (stdin     )] :Essential :InputFile
    [-o[utput]           Out                 (stdout    )] :Essential :OutputDataFile
    [-kV                 kV                  (200       )] :Optional  :AccVol[kV]
    [-Cs                 Cs                  (2.1       )] :Optional  :Cs[mm]
    [-df                 Defocus             (27000     )] :Optional  :Defocus [A]:under(+)
    [-A                  AoverP              (0.0       )] :Optional  :AmplitudeContrast/PhaseContrast
    [-Ain                Ain                 (0.0       )] :Optional  :IlluminationAperture[mrad]
    [-white              WhiteNoise          (1.0       )] :Optional  :WhiteNoise(N/S)
    [-SinWin             SinWinRmin          (0.1       )SinWinRmax          (1.0       )] :Optional  :Windowing by sine function from Rmin[A] to Rmax[A]
    [-ctfMode            ctfMode             (0         )] :Optional  :CTFMode
    [-Astig[matism]      dfMin               (0         )dfMax               (0         )asAxis              (0         )] :Optional  :With Atigmatism
    [-c[onfig]           configFile          (NULL      )] :Optional  :ConfigurationFile
    [-m[ode]             mode                (0         )] :Optional  :Mode
----- ctfMode -----
-ctfMode 0  : Phase Only
-ctfMode 1  : Phase and Amplitude 
-ctfMode 32  : With Illumination Angle
-ctfMode 256  : As Absolute Value