Package: ceu1kg

Version: 0.0.18

Command: D:\biocbld\bbs-2.7-bioc\R\bin\R.exe CMD check --no-vignettes --timings ceu1kg_0.0.18.tar.gz

StartedAt: 2011-03-23 15:07:35 -0700 (Wed, 23 Mar 2011)

EndedAt: 2011-03-23 15:15:36 -0700 (Wed, 23 Mar 2011)

EllapsedTime: 481.3 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: ceu1kg.Rcheck

Warnings: 1

* using log directory 'D:/biocbld/bbs-2.7-data-experiment/meat/ceu1kg.Rcheck'
* using R version 2.12.2 (2011-02-25)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'ceu1kg/DESCRIPTION' ... OK
* this is package 'ceu1kg' version '0.0.18'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'ceu1kg' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ...Warning: running command '"D:\biocbld\bbs-2.7-bioc\R/bin/x64/Rterm.exe"  --vanilla --slave -f D:\biocbld\bbs-2.7-data-experiment\tmpdir\RtmpjxFcAb\Rin7d2b382e' had status 1
 NOTE
  Error in .requirePackage(package) : 
    unable to find required package "snpMatrix2"
  Calls: <Anonymous> ... .findInheritedMethods -> getClass -> getClassDef -> .requirePackage
  Execution halted
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... WARNING
Package vignettes without corresponding PDF:


D:/biocbld/bbs-2.7-data-experiment/meat/ceu1kg.Rcheck/00_pkg_src/ceu1kg/inst/doc/ceu1kg.Rnw
 SKIPPED
* checking PDF version of manual ... OK

WARNING: There was 1 warning, see
  'D:/biocbld/bbs-2.7-data-experiment/meat/ceu1kg.Rcheck/00check.log'
for details

* installing *source* package 'ceu1kg' ...
** data
** inst
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (ceu1kg)

name	user	system	elapsed
ceu1kg-package	0	0	0
ceu1kg.sml	0	0	0
ceu1kgMeta_20	3.89	0.03	7.07