Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q [R] S  T  U  V  W  X  Y  Z 

Package 387/458HostnameOS / ArchBUILDCHECKBUILD BIN
Rsubread 0.99.2
Wei Shi
Snapshot Date: 2011-04-06 11:17:57 -0700 (Wed, 06 Apr 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/Rsubread
Last Changed Rev: 54527 / Revision: 54545
Last Changed Date: 2011-04-05 23:43:27 -0700 (Tue, 05 Apr 2011)
lamb1 Linux (openSUSE 11.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ ERROR ] skipped  skipped 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  ERROR  skipped  skipped 
pelham Mac OS X Leopard (10.5.8) / i386  ERROR  skipped  skipped 

Summary

Package: Rsubread
Version: 0.99.2
Command: chmod a+r Rsubread -R && E:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD build --keep-empty-dirs Rsubread
StartedAt: 2011-04-06 19:02:06 -0700 (Wed, 06 Apr 2011)
EndedAt: 2011-04-06 19:02:11 -0700 (Wed, 06 Apr 2011)
EllapsedTime: 5.8 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'Rsubread/DESCRIPTION' ... OK
* preparing 'Rsubread':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
      -----------------------------------
* installing *source* package 'Rsubread' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
gcc -I"E:/biocbld/BBS-2˜1.8-B/R/include"          -O3 -Wall  -std=gnu99 -c R_wrapper.c -o R_wrapper.o
gcc -I"E:/biocbld/BBS-2˜1.8-B/R/include"          -O3 -Wall  -std=gnu99 -c aligner.c -o aligner.o
aligner.c:6:21: fatal error: pthread.h: No such file or directory
compilation terminated.
make: *** [aligner.o] Error 1
ERROR: compilation failed for package 'Rsubread'
* removing 'E:/biocbld/bbs-2.8-bioc/tmpdir/RtmpAwrDZv/Rinst397569fe/Rsubread'
      -----------------------------------
ERROR: package installation failed