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Package 137/430HostnameOS / ArchBUILDCHECKBUILD BIN
flowMerge 1.5.0
Greg Finak
Snapshot Date: 2011-01-19 11:24:30 -0800 (Wed, 19 Jan 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/flowMerge
Last Changed Rev: 50295 / Revision: 51972
Last Changed Date: 2010-10-17 22:57:44 -0700 (Sun, 17 Oct 2010)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.4) / i386  OK  OK  OK 

Summary

Package: flowMerge
Version: 1.5.0
Command: D:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD check --no-vignettes --timings flowMerge_1.5.0.tar.gz
StartedAt: 2011-01-19 19:25:02 -0800 (Wed, 19 Jan 2011)
EndedAt: 2011-01-19 19:27:02 -0800 (Wed, 19 Jan 2011)
EllapsedTime: 119.5 seconds
RetCode: 0
Status:  OK  
CheckDir: flowMerge.Rcheck
Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.8-bioc/meat/flowMerge.Rcheck'
* using R version 2.13.0 Under development (unstable) (2011-01-10 r53950)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'flowMerge/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'flowMerge' version '1.5.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'flowMerge' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

flowMerge.Rcheck/00install.out:

* installing *source* package 'flowMerge' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: mnormt
Loading required package: ellipse
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: flowCore
Loading required package: rrcov
Loading required package: robustbase
Loading required package: pcaPP
Loading required package: mvtnorm
Scalable Robust Estimators with High Breakdown Point (version 1.1-00)

Attaching package: 'flowCore'

The following object(s) are masked from 'package:stats':

    alias, filter


Attaching package: 'flowClust'

The following object(s) are masked from 'package:mvtnorm':

    dmvt

The following object(s) are masked from 'package:graphics':

    box


Attaching package: 'snow'

The following object(s) are masked from 'package:base':

    enquote

Creating a new generic function for "merge" in "flowMerge"
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (flowMerge)

flowMerge.Rcheck/flowMerge-Ex.timings:

nameusersystemelapsed
NENT0.870.000.92
fitPiecewiseLinreg0.720.020.73
flowClust.res0.060.020.08
flowMerge-package0.780.000.78
flowObj0.740.010.75
map0.010.000.02
merge-methods0.750.000.75
merge0.710.020.72
pFlowMerge42.62 0.0042.64
plot-methods0.920.030.95
updateU0.770.000.77