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Package 13/84HostnameOS / ArchBUILDCHECKBUILD BIN
CLL 1.2.8
Robert Gentleman
Snapshot Date: 2010-11-12 00:25:07 -0800 (Fri, 12 Nov 2010)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/CLL
Last Changed Rev: 1063 / Revision: 1384
Last Changed Date: 2009-10-13 23:47:36 -0700 (Tue, 13 Oct 2009)
lamb1 Linux (openSUSE 11.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: CLL
Version: 1.2.8
Command: E:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD check --no-vignettes --timings CLL_1.2.8.tar.gz
StartedAt: 2010-11-12 03:30:00 -0800 (Fri, 12 Nov 2010)
EndedAt: 2010-11-12 03:31:12 -0800 (Fri, 12 Nov 2010)
EllapsedTime: 71.9 seconds
RetCode: 0
Status:  OK  
CheckDir: CLL.Rcheck
Warnings: 0

Command output

* using log directory 'E:/biocbld/bbs-2.8-data-experiment/meat/CLL.Rcheck'
* using R version 2.13.0 Under development (unstable) (2010-11-10 r53547)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'CLL/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'CLL' version '1.2.8'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'CLL' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

CLL.Rcheck/00install.out:

* installing *source* package 'CLL' ...
** R
** data
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (CLL)

CLL.Rcheck/CLL-Ex.timings:

nameusersystemelapsed
CLL-package0.120.020.14
CLLbatch5.300.085.37
disease000
nsFilter0.300.010.45
sCLLex0.130.000.36
sFiltert0.140.020.16
sFiltertBH0.120.030.15