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Package 364/472HostnameOS / ArchBUILDCHECKBUILD BIN
R453Plus1Toolbox 1.3.1
Hans-Ulrich Klein
Snapshot Date: 2011-06-21 19:21:48 -0700 (Tue, 21 Jun 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/R453Plus1Toolbox
Last Changed Rev: 56341 / Revision: 56351
Last Changed Date: 2011-06-21 05:19:54 -0700 (Tue, 21 Jun 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  ERROR  skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64  ERROR  skipped  skipped 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  ERROR  skipped  skipped 
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  ERROR  skipped  skipped 
pelham Mac OS X Leopard (10.5.8) / i386 [ ERROR ] skipped  skipped 

Summary

Package: R453Plus1Toolbox
Version: 1.3.1
Command: /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data R453Plus1Toolbox
StartedAt: 2011-06-22 00:33:29 -0700 (Wed, 22 Jun 2011)
EndedAt: 2011-06-22 00:34:04 -0700 (Wed, 22 Jun 2011)
EllapsedTime: 35.0 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

* checking for file ‘R453Plus1Toolbox/DESCRIPTION’ ... OK
* preparing ‘R453Plus1Toolbox’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
      -----------------------------------
* installing *source* package ‘R453Plus1Toolbox’ ...
** libs
*** arch - i386
gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.14/Resources/include -I/Library/Frameworks/R.framework/Versions/2.14/Resources/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c readSFF.c -o readSFF.o
gcc-4.2 -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o R453Plus1Toolbox.so readSFF.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/RtmpXpda9t/Rinst68fa0400/R453Plus1Toolbox/libs/i386
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  ‘browseVignettes()’. To cite Bioconductor, see
  ‘citation("Biobase")’ and for packages ‘citation("pkgname")’.

Loading required package: IRanges

Attaching package: ‘IRanges’

The following object(s) are masked from ‘package:Biobase’:

    updateObject

The following object(s) are masked from ‘package:base’:

    Map, cbind, eval, intersect, mapply, order, paste, pmax, pmax.int,
    pmin, pmin.int, rbind, rep.int, setdiff, table, union

Loading required package: BSgenome
Loading required package: GenomicRanges
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   ‘vignette.Rnw’ 
** testing if installed package can be loaded
Error in namespaceExport(ns, exports) : undefined exports: readSFF
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/private/tmp/RtmpXpda9t/Rinst68fa0400/R453Plus1Toolbox’
      -----------------------------------
ERROR: package installation failed