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Package 413/516HostnameOS / ArchBUILDCHECKBUILD BIN
RedeR 1.0.0
Mauro Castro
Snapshot Date: 2012-01-08 18:22:44 -0800 (Sun, 08 Jan 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/RedeR
Last Changed Rev: 59920 / Revision: 61898
Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK [ OK ] OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: RedeR
Version: 1.0.0
Command: D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --no-vignettes --timings --no-multiarch RedeR_1.0.0.tar.gz
StartedAt: 2012-01-09 05:13:47 -0800 (Mon, 09 Jan 2012)
EndedAt: 2012-01-09 05:15:02 -0800 (Mon, 09 Jan 2012)
EllapsedTime: 74.9 seconds
RetCode: 0
Status:  OK  
CheckDir: RedeR.Rcheck
Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.9-bioc/meat/RedeR.Rcheck'
* using R version 2.14.1 (2011-12-22)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'RedeR/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'RedeR' version '1.0.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'RedeR' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 16.7Mb
  sub-directories of 1Mb or more:
    data   6.3Mb
    doc    2.5Mb
    java   7.3Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

RedeR.Rcheck/00install.out:

* installing *source* package 'RedeR' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'RedeR.Rnw' 
** testing if installed package can be loaded

* DONE (RedeR)

RedeR.Rcheck/RedeR-Ex.timings:

nameusersystemelapsed
PluginBuilder-class000
PluginBuilder000
RedPort-class0.010.000.02
RedPort000
RedeR.data0.320.010.33
addEdgeBetweenContainers000
addEdges000
addGraph000
addNodes000
addSeries000
addSubgraph0.020.000.02
addSubgraph.list000
calld000
deSelectEdges000
deSelectGraph000
deSelectNodes000
deleteEdges000
deleteNodes000
deletePlugin0.000.020.02
deleteSelectedEdges000
deleteSelectedNodes000
duplicateGraph000
dynwin000
exitd000
getArrowDirection000
getContainerComponets000
getEdgeColor000
getEdgeIDs000
getEdgeType000
getEdgeWeight0.020.000.02
getEdgeWidth000
getEdges000
getGraph000
getNodeAliases000
getNodeBend000
getNodeColor000
getNodeFontColor000
getNodeFontName000
getNodeFontSize0.020.000.01
getNodeFontStyle000
getNodeFontX000
getNodeFontY000
getNodeH000
getNodeIDs000
getNodeLineColor000
getNodeLineWidth000
getNodeShape000
getNodeSize000
getNodeW000
getNodeWeight000
getNodeX000
getNodeY000
getNodes000
getSourceEdgeIDs000
getSourceEdges000
getTargetEdgeIDs000
getTargetEdges000
gtoy.rm0.020.000.12
isDynamicsActive0.010.000.02
mergeNodes000
mergeOutEdges000
nestNodes000
nesthc0.020.000.02
ping000
pluginParser000
resetd000
selectAllEdges000
selectAllNodes000
selectEdges000
selectGraph000
selectNodes000
setArrowDirection000
setEdgeColor000
setEdgeType000
setEdgeWeight000
setEdgeWidth000
setNodeAliases000
setNodeBend000
setNodeColor000
setNodeFontColor000
setNodeFontName000
setNodeFontSize000
setNodeFontStyle000
setNodeFontXY000
setNodeLineColor000
setNodeLineWidth000
setNodeShape000
setNodeSize000
setNodeWeight000
setNodeXY000
submitPlugin000
updateContainerSize000
updateGraph000
updatePlugins000
version000