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Package 1/472HostnameOS / ArchBUILDCHECKBUILD BIN
a4 1.1.2
Tobias Verbeke
Snapshot Date: 2011-06-21 19:21:48 -0700 (Tue, 21 Jun 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/a4
Last Changed Rev: 56260 / Revision: 56351
Last Changed Date: 2011-06-16 18:18:20 -0700 (Thu, 16 Jun 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  WARNINGS  OK 
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]

Summary

Package: a4
Version: 1.1.2
Command: mkdir a4.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh a4_1.1.2.tar.gz /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R a4.buildbin-libdir
StartedAt: 2011-06-22 05:57:59 -0700 (Wed, 22 Jun 2011)
EndedAt: 2011-06-22 05:58:38 -0700 (Wed, 22 Jun 2011)
EllapsedTime: 38.2 seconds
RetCode: 0
Status:  OK 
PackageFile: a4_1.1.2.tgz
PackageFileSize: 934 KiB

Command output

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --library=a4.buildbin-libdir a4_1.1.2.tar.gz'
>>>>>>> 

* installing *source* package ‘a4’ ...
** R
** inst
** preparing package for lazy loading
Loading required package: grid
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: AnnotationDbi
Loading required package: annaffy
Loading required package: GO.db
Loading required package: DBI

Loading required package: KEGG.db

Loading required package: mpm
Loading required package: MASS
Loading required package: KernSmooth
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009

mpm version 1.0-17

Loading required package: genefilter

Attaching package: ‘genefilter’

The following object(s) are masked from ‘package:MASS’:

    area

Loading required package: limma
Loading required package: multtest
Loading required package: glmnet
Loading required package: Matrix
Loading required package: lattice

Attaching package: ‘Matrix’

The following object(s) are masked from ‘package:base’:

    det

Loaded glmnet 1.7 
Loading required package: a4Preproc
Loading required package: a4Core

Attaching package: ‘a4Core’

The following object(s) are masked from ‘package:limma’:

    topTable

Loading required package: gplots
Loading required package: gtools
Loading required package: gdata
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.

gdata: Unable to load perl libaries needed by read.xls()
gdata: to support 'XLSX' (Excel 2007+) files.

gdata: Run the function 'installXLSXsupport()'
gdata: to automatically download and install the perl
gdata: libaries needed to support Excel XLS and XLSX formats.

Attaching package: ‘gdata’

The following object(s) are masked from ‘package:Biobase’:

    combine

The following object(s) are masked from ‘package:stats’:

    nobs

The following object(s) are masked from ‘package:utils’:

    object.size

Loading required package: caTools
Loading required package: bitops

Attaching package: ‘gplots’

The following object(s) are masked from ‘package:multtest’:

    wapply

The following object(s) are masked from ‘package:stats’:

    lowess


a4Base version 1.1.3

Loading required package: MLInterfaces
Loading required package: rpart
Loading required package: rda
Loading required package: annotate
Loading required package: cluster
Loading required package: ROCR
Loading required package: pamr
Loading required package: survival
Loading required package: splines
Loading required package: varSelRF
Loading required package: randomForest
randomForest 4.6-2
Type rfNews() to see new features/changes/bug fixes.

Attaching package: ‘randomForest’

The following object(s) are masked from ‘package:gdata’:

    combine

The following object(s) are masked from ‘package:Biobase’:

    combine

** help
No man pages found in package  ‘a4’ 
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   ‘a4vignette.Rnw’ 
** testing if installed package can be loaded

mpm version 1.0-17

Loaded glmnet 1.7 

a4Base version 1.1.3


* DONE (a4)