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Package 333/516HostnameOS / ArchBUILDCHECKBUILD BIN
mzR 1.0.2
Bernd Fischer
Snapshot Date: 2012-01-08 18:22:44 -0800 (Sun, 08 Jan 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/mzR
Last Changed Rev: 60414 / Revision: 61898
Last Changed Date: 2011-11-16 16:05:53 -0800 (Wed, 16 Nov 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: mzR
Version: 1.0.2
Command: E:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --no-vignettes --timings --no-multiarch mzR_1.0.2.tar.gz
StartedAt: 2012-01-09 04:28:31 -0800 (Mon, 09 Jan 2012)
EndedAt: 2012-01-09 04:33:12 -0800 (Mon, 09 Jan 2012)
EllapsedTime: 281.4 seconds
RetCode: 0
Status:  OK  
CheckDir: mzR.Rcheck
Warnings: 0

Command output

* using log directory 'E:/biocbld/bbs-2.9-bioc/meat/mzR.Rcheck'
* using R version 2.14.1 (2011-12-22)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'mzR/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'mzR' version '1.0.2'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'mzR' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
File 'mzR/R/zzz.R':
  .onLoad calls:
    require("methods", character = TRUE, quietly = TRUE)

Package startup functions should not change the search path.
See section 'Good practice' in ?.onAttach.

* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... NOTE
File 'E:/biocbld/bbs-2.9-bioc/meat/mzR.Rcheck/mzR/libs/i386/mzR.dll':
  Found '_assert', possibly from 'assert' (C)
  Found 'exit', possibly from 'exit' (C), 'stop' (Fortran)
  Found 'printf', possibly from 'printf' (C)
  Found 'puts', possibly from 'printf' (C), 'puts' (C)

Compiled code should not call functions which might terminate R nor
write to stdout/stderr instead of to the console.  The detected symbols
are linked into the code but might come from libraries and not actually
be called.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking examples ... OK
* checking for unstated dependencies in tests ... OK
* checking tests ...
  Running 'doRUnit.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

mzR.Rcheck/00install.out:

* installing *source* package 'mzR' ...
** libs
rm -f cramp.o  ramp_base64.o  ramp.o  RcppRamp.o RcppRampModule.o rnetCDF.o ./boost/system/src/error_code.o ./boost/regex/src/posix_api.o ./boost/regex/src/fileiter.o ./boost/regex/src/regex_raw_buffer.o ./boost/regex/src/cregex.o ./boost/regex/src/regex_debug.o ./boost/regex/src/instances.o ./boost/regex/src/icu.o ./boost/regex/src/usinstances.o ./boost/regex/src/regex.o ./boost/regex/src/wide_posix_api.o ./boost/regex/src/regex_traits_defaults.o ./boost/regex/src/winstances.o ./boost/regex/src/wc_regex_traits.o ./boost/regex/src/c_regex_traits.o ./boost/regex/src/cpp_regex_traits.o ./boost/regex/src/static_mutex.o ./boost/regex/src/w32_regex_traits.o ./pwiz/data/msdata/Version.o ./pwiz/utility/minimxml/XMLWriter.o ./pwiz/utility/minimxml/SAXParser.o ./boost/iostreams/src/zlib.o ./boost/filesystem/src/operations.o ./pwiz/data/common/MemoryIndex.o ./pwiz/data/common/CVTranslator.o ./pwiz/data/common/cv.o ./pwiz/data/common/ParamTypes.o ./pwiz/data/common/BinaryIndexStream.o ./pwiz/data/common/diff_std.o ./pwiz/data/msdata/SpectrumList_MGF.o ./pwiz/data/msdata/DefaultReaderList.o ./pwiz/data/msdata/ChromatogramList_mzML.o ./pwiz/data/msdata/examples.o ./pwiz/data/msdata/Serializer_mzML.o ./pwiz/data/msdata/Serializer_MSn.o ./pwiz/data/msdata/Reader.o ./pwiz/data/msdata/Serializer_MGF.o ./pwiz/data/msdata/Serializer_mzXML.o ./pwiz/data/msdata/SpectrumList_mzML.o ./pwiz/data/msdata/SpectrumList_MSn.o ./pwiz/data/msdata/BinaryDataEncoder.o ./pwiz/data/msdata/Diff.o ./pwiz/data/msdata/MSData.o ./pwiz/data/msdata/References.o ./pwiz/data/msdata/SpectrumList_mzXML.o ./pwiz/data/msdata/IO.o ./pwiz/data/msdata/SpectrumList_BTDX.o ./pwiz/data/msdata/SpectrumInfo.o ./pwiz/data/msdata/RAMPAdapter.o ./pwiz/data/msdata/ramp/wglob.o ./pwiz/data/msdata/LegacyAdapter.o ./pwiz/data/msdata/SpectrumIterator.o ./pwiz/data/msdata/MSDataFile.o ./pwiz/data/msdata/SpectrumListCache.o ./pwiz/utility/misc/IntegerSet.o ./pwiz/utility/misc/Base64.o ./pwiz/utility/misc/IterationListener.o ./pwiz/utility/misc/MSIHandler.o ./pwiz/utility/misc/Filesystem.o ./pwiz/utility/misc/TabReader.o ./pwiz/utility/misc/random_access_compressed_ifstream.o ./pwiz/utility/misc/SHA1.o ./pwiz/utility/misc/SHA1Calculator.o ./pwiz/utility/misc/sha1calc.o ./random_access_gzFile.o 
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c cramp.cpp -o cramp.o
cramp.cpp:4:1: warning: "/*" within comment
cramp.h: In constructor 'cRamp::cRamp(const char*, bool)':
cramp.h:143:9: warning: 'cRamp::m_declaredScansOnly' will be initialized after
cramp.h:142:17: warning:   'rampRunInfo* cRamp::m_runInfo'
cramp.cpp:59:1: warning:   when initialized here
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c ramp_base64.cpp -o ramp_base64.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c ramp.cpp -o ramp.o
ramp.cpp:67:0: warning: "S_ISDIR" redefined
c:\rtools214\mingw\bin\../lib/gcc/mingw32/4.5.0/../../../../include/sys/stat.h:68:0: note: this is the location of the previous definition
ramp.cpp: In function 'RAMPFILE* rampOpenFile(const char*)':
ramp.cpp:201:18: warning: unused variable 'fgot'
ramp.cpp: In function 'ramp_fileoffset_t getIndexOffset(RAMPFILE*)':
ramp.cpp:378:11: warning: unused variable 'nread'
ramp.cpp: In function 'ramp_fileoffset_t* readIndex(RAMPFILE*, ramp_fileoffset_t, int*)':
ramp.cpp:555:22: warning: unused variable 'fgot'
ramp.cpp:591:22: warning: unused variable 'fgot'
ramp.cpp:627:19: warning: unused variable 'fgot'
ramp.cpp: In function 'void readHeader(RAMPFILE*, ramp_fileoffset_t, ScanHeaderStruct*)':
ramp.cpp:1133:22: warning: unused variable 'fgot'
ramp.cpp: In function 'int readMsLevel(RAMPFILE*, ramp_fileoffset_t)':
ramp.cpp:1211:13: warning: unused variable 'fgot'
ramp.cpp:1207:10: warning: unused variable 'fgot'
ramp.cpp: In function 'RAMPREAL* readPeaks(RAMPFILE*, ramp_fileoffset_t)':
ramp.cpp:1705:23: warning: unused variable 'nread'
ramp.cpp:1878:21: warning: unused variable 'fgot'
ramp.cpp:1922:17: warning: unused variable 'nread'
ramp.cpp:1803:13: warning: unused variable 'fgot'
ramp.cpp: In function 'void readMSRun(RAMPFILE*, RunHeaderStruct*)':
ramp.cpp:2080:13: warning: unused variable 'fgot'
ramp.cpp:2100:13: warning: unused variable 'fgot'
ramp.cpp:2076:10: warning: unused variable 'fgot'
ramp.cpp: In function 'InstrumentStruct* getInstrumentStruct(RAMPFILE*)':
ramp.cpp:2242:16: warning: unused variable 'fgot'
ramp.cpp:2278:15: warning: unused variable 'fgot'
ramp.cpp:2232:10: warning: unused variable 'fgot'
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c RcppRamp.cpp -o RcppRamp.o
RcppRamp.cpp: In member function 'Rcpp::DataFrame RcppRamp::getAllScanHeaderInfo()':
RcppRamp.cpp:170:21: warning: unused variable 'info'
RcppRamp.cpp: In member function 'Rcpp::NumericMatrix RcppRamp::get3DMap(std::vector<int>, double, double, double)':
RcppRamp.cpp:309:42: warning: comparison between signed and unsigned integer expressions
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c RcppRampModule.cpp -o RcppRampModule.o
gcc  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"   -D_LARGEFILE_SOURCE -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN -fgnu89-inline   -O3 -Wall  -std=gnu99 -mtune=core2 -c rnetCDF.c -o rnetCDF.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/system/src/error_code.cpp -o boost/system/src/error_code.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/posix_api.cpp -o boost/regex/src/posix_api.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/fileiter.cpp -o boost/regex/src/fileiter.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/regex_raw_buffer.cpp -o boost/regex/src/regex_raw_buffer.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/cregex.cpp -o boost/regex/src/cregex.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/regex_debug.cpp -o boost/regex/src/regex_debug.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/instances.cpp -o boost/regex/src/instances.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/icu.cpp -o boost/regex/src/icu.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/usinstances.cpp -o boost/regex/src/usinstances.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/regex.cpp -o boost/regex/src/regex.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/wide_posix_api.cpp -o boost/regex/src/wide_posix_api.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/regex_traits_defaults.cpp -o boost/regex/src/regex_traits_defaults.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/winstances.cpp -o boost/regex/src/winstances.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/wc_regex_traits.cpp -o boost/regex/src/wc_regex_traits.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/c_regex_traits.cpp -o boost/regex/src/c_regex_traits.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/cpp_regex_traits.cpp -o boost/regex/src/cpp_regex_traits.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/static_mutex.cpp -o boost/regex/src/static_mutex.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/regex/src/w32_regex_traits.cpp -o boost/regex/src/w32_regex_traits.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/Version.cpp -o pwiz/data/msdata/Version.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/utility/minimxml/XMLWriter.cpp -o pwiz/utility/minimxml/XMLWriter.o
pwiz/utility/minimxml/XMLWriter.cpp: In member function 'void pwiz::minimxml::XMLWriter::Impl::startElement(const std::string&, const pwiz::minimxml::XMLWriter::Attributes&, pwiz::minimxml::XMLWriter::EmptyElementTag)':
pwiz/utility/minimxml/XMLWriter.cpp:160:59: warning: suggest parentheses around '&&' within '||'
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/utility/minimxml/SAXParser.cpp -o pwiz/utility/minimxml/SAXParser.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/iostreams/src/zlib.cpp -o boost/iostreams/src/zlib.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c boost/filesystem/src/operations.cpp -o boost/filesystem/src/operations.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/common/MemoryIndex.cpp -o pwiz/data/common/MemoryIndex.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/common/CVTranslator.cpp -o pwiz/data/common/CVTranslator.o
pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldIgnore(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)':
pwiz/data/common/CVTranslator.cpp:134:49: warning: suggest parentheses around '&&' within '||'
pwiz/data/common/CVTranslator.cpp:135:49: warning: suggest parentheses around '&&' within '||'
pwiz/data/common/CVTranslator.cpp:136:49: warning: suggest parentheses around '&&' within '||'
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/common/cv.cpp -o pwiz/data/common/cv.o
In file included from ./boost/thread/win32/once.hpp:18:0,
                 from ./boost/thread/once.hpp:14,
                 from ./boost_aux/boost/utility/detail/singleton_manager.hpp:18,
                 from ./boost_aux/boost/utility/singleton.hpp:19,
                 from pwiz/data/common/cv.cpp:32:
./boost/thread/win32/thread_primitives.hpp:123:73: warning: declaration of 'void boost::detail::win32::Sleep(long unsigned int)' with C language linkage
./boost/smart_ptr/detail/yield_k.hpp:58:29: warning: conflicts with previous declaration 'void boost::detail::Sleep(unsigned int)'
In file included from ./boost/thread/once.hpp:14:0,
                 from ./boost_aux/boost/utility/detail/singleton_manager.hpp:18,
                 from ./boost_aux/boost/utility/singleton.hpp:19,
                 from pwiz/data/common/cv.cpp:32:
./boost/thread/win32/once.hpp: In function 'void boost::call_once(boost::once_flag&, Function) [with Function = void (*)()]':
./boost/thread/once.hpp:27:28:   instantiated from here
./boost/thread/win32/once.hpp:172:21: warning: value computed is not used
In file included from ./boost_aux/boost/utility/singleton.hpp:19:0,
                 from pwiz/data/common/cv.cpp:32:
./boost_aux/boost/utility/detail/singleton_manager.hpp: In static member function 'static void boost::detail::singleton_manager<Tag>::create_instance() [with Tag = void]':
./boost_aux/boost/utility/detail/singleton_manager.hpp:80:13: warning: visibility attribute not supported in this configuration; ignored
./boost_aux/boost/utility/detail/singleton_manager.hpp: In static member function 'static void boost::detail::singleton_manager<Tag>::again(boost::once_flag&) [with Tag = void]':
./boost_aux/boost/utility/detail/singleton_manager.hpp:127:13: warning: visibility attribute not supported in this configuration; ignored
pwiz/data/common/cv.cpp: At global scope:
pwiz/data/common/cv.cpp:5719:1: warning: visibility attribute not supported in this configuration; ignored
pwiz/data/common/cv.cpp:5719:1: warning: visibility attribute not supported in this configuration; ignored
pwiz/data/common/cv.cpp:5719:1: warning: visibility attribute not supported in this configuration; ignored
pwiz/data/common/cv.cpp:5719:1: warning: visibility attribute not supported in this configuration; ignored
pwiz/data/common/cv.cpp:5719:1: warning: visibility attribute not supported in this configuration; ignored
pwiz/data/common/cv.cpp:5719:1: warning: visibility attribute not supported in this configuration; ignored
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/common/ParamTypes.cpp -o pwiz/data/common/ParamTypes.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/common/BinaryIndexStream.cpp -o pwiz/data/common/BinaryIndexStream.o
In file included from ./boost/thread/win32/thread_data.hpp:11:0,
                 from ./boost/thread/thread.hpp:15,
                 from pwiz/data/common/BinaryIndexStream.cpp:27:
./boost/thread/win32/thread_primitives.hpp:123:73: warning: declaration of 'void boost::detail::win32::Sleep(long unsigned int)' with C language linkage
./boost/smart_ptr/detail/yield_k.hpp:58:29: warning: conflicts with previous declaration 'void boost::detail::Sleep(unsigned int)'
In file included from ./boost/thread/shared_mutex.hpp:14:0,
                 from ./boost/thread/detail/thread_group.hpp:9,
                 from ./boost/thread/thread.hpp:24,
                 from pwiz/data/common/BinaryIndexStream.cpp:27:
./boost/thread/win32/shared_mutex.hpp: In member function 'T boost::shared_mutex::interlocked_compare_exchange(T*, T, T) [with T = boost::shared_mutex::state_data]':
./boost/thread/win32/shared_mutex.hpp:102:103:   instantiated from here
./boost/thread/win32/shared_mutex.hpp:48:99: warning: dereferencing type-punned pointer will break strict-aliasing rules
./boost/thread/win32/shared_mutex.hpp:48:99: warning: dereferencing type-punned pointer will break strict-aliasing rules
./boost/thread/win32/shared_mutex.hpp:49:52: warning: dereferencing type-punned pointer will break strict-aliasing rules
./boost/thread/win32/shared_mutex.hpp:49:52: warning: dereferencing type-punned pointer will break strict-aliasing rules
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/common/diff_std.cpp -o pwiz/data/common/diff_std.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/SpectrumList_MGF.cpp -o pwiz/data/msdata/SpectrumList_MGF.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/DefaultReaderList.cpp -o pwiz/data/msdata/DefaultReaderList.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/ChromatogramList_mzML.cpp -o pwiz/data/msdata/ChromatogramList_mzML.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/examples.cpp -o pwiz/data/msdata/examples.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/Serializer_mzML.cpp -o pwiz/data/msdata/Serializer_mzML.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/Serializer_MSn.cpp -o pwiz/data/msdata/Serializer_MSn.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/Reader.cpp -o pwiz/data/msdata/Reader.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/Serializer_MGF.cpp -o pwiz/data/msdata/Serializer_MGF.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/Serializer_mzXML.cpp -o pwiz/data/msdata/Serializer_mzXML.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/SpectrumList_mzML.cpp -o pwiz/data/msdata/SpectrumList_mzML.o
In file included from ./boost/thread/win32/once.hpp:18:0,
                 from ./boost/thread/once.hpp:14,
                 from ./pwiz/utility/misc/Once.hpp:25,
                 from pwiz/data/msdata/SpectrumList_mzML.cpp:31:
./boost/thread/win32/thread_primitives.hpp:123:73: warning: declaration of 'void boost::detail::win32::Sleep(long unsigned int)' with C language linkage
./boost/smart_ptr/detail/yield_k.hpp:58:29: warning: conflicts with previous declaration 'void boost::detail::Sleep(unsigned int)'
In file included from ./boost/thread/once.hpp:14:0,
                 from ./pwiz/utility/misc/Once.hpp:25,
                 from pwiz/data/msdata/SpectrumList_mzML.cpp:31:
./boost/thread/win32/once.hpp: In function 'void boost::call_once(boost::once_flag&, Function) [with Function = void (*)()]':
./boost/thread/once.hpp:27:28:   instantiated from here
./boost/thread/win32/once.hpp:172:21: warning: value computed is not used
./boost/thread/win32/once.hpp: In function 'void boost::call_once(boost::once_flag&, Function) [with Function = boost::_bi::bind_t<void, boost::_mfi::cmf0<void, pwiz::msdata::<unnamed>::SpectrumList_mzMLImpl>, boost::_bi::list1<boost::_bi::value<const pwiz::msdata::<unnamed>::SpectrumList_mzMLImpl*> > >]':
pwiz/data/msdata/SpectrumList_mzML.cpp:94:97:   instantiated from here
./boost/thread/win32/once.hpp:172:21: warning: value computed is not used
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/SpectrumList_MSn.cpp -o pwiz/data/msdata/SpectrumList_MSn.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/BinaryDataEncoder.cpp -o pwiz/data/msdata/BinaryDataEncoder.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/Diff.cpp -o pwiz/data/msdata/Diff.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/MSData.cpp -o pwiz/data/msdata/MSData.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/References.cpp -o pwiz/data/msdata/References.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/SpectrumList_mzXML.cpp -o pwiz/data/msdata/SpectrumList_mzXML.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/IO.cpp -o pwiz/data/msdata/IO.o
pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrum::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)':
pwiz/data/msdata/IO.cpp:1939:86: warning: suggest parentheses around '&&' within '||'
pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerMSData::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)':
pwiz/data/msdata/IO.cpp:2644:26: warning: suggest parentheses around '&&' within '||'
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/SpectrumList_BTDX.cpp -o pwiz/data/msdata/SpectrumList_BTDX.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/SpectrumInfo.cpp -o pwiz/data/msdata/SpectrumInfo.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/RAMPAdapter.cpp -o pwiz/data/msdata/RAMPAdapter.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/ramp/wglob.cpp -o pwiz/data/msdata/ramp/wglob.o
pwiz/data/msdata/ramp/wglob.cpp: In function 'int glob(const char*, int, int*, glob_t*)':
pwiz/data/msdata/ramp/wglob.cpp:63:9: warning: unused variable 'fileList'
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/LegacyAdapter.cpp -o pwiz/data/msdata/LegacyAdapter.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/SpectrumIterator.cpp -o pwiz/data/msdata/SpectrumIterator.o
pwiz/data/msdata/SpectrumIterator.cpp: In member function 'bool pwiz::msdata::SpectrumIterator::Impl::equal(const pwiz::msdata::SpectrumIterator::Impl&) const':
pwiz/data/msdata/SpectrumIterator.cpp:126:58: warning: suggest parentheses around '&&' within '||'
pwiz/data/msdata/SpectrumIterator.cpp:127:72: warning: suggest parentheses around '&&' within '||'
pwiz/data/msdata/SpectrumIterator.cpp: In member function 'bool pwiz::msdata::SpectrumIterator::Impl::done() const':
pwiz/data/msdata/SpectrumIterator.cpp:142:48: warning: suggest parentheses around '&&' within '||'
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/MSDataFile.cpp -o pwiz/data/msdata/MSDataFile.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/data/msdata/SpectrumListCache.cpp -o pwiz/data/msdata/SpectrumListCache.o
In file included from ./boost/multi_index_container.hpp:39:0,
                 from ./pwiz/utility/misc/mru_list.hpp:25,
                 from pwiz/data/msdata/MemoryMRUCache.hpp:27,
                 from pwiz/data/msdata/SpectrumListCache.hpp:28,
                 from pwiz/data/msdata/SpectrumListCache.cpp:25:
./boost/multi_index/detail/safe_mode.hpp: In function 'bool boost::multi_index::safe_mode::check_is_owner(const Iterator&, const typename Iterator::container_type&) [with Iterator = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >, typename Iterator::container_type = boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> >]':
./boost/multi_index/sequenced_index.hpp:508:5:   instantiated from 'void boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::relocate(boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::iterator, boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::iterator) [with SuperMeta = boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, TagList = boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::iterator = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >, typename SuperMeta::type::node_type = boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >]'
./pwiz/utility/misc/mru_list.hpp:74:7:   instantiated from 'bool pwiz::util::mru_list<Item>::insert(const item_type&) [with Item = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, item_type = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >]'
pwiz/data/msdata/SpectrumListCache.cpp:102:74:   instantiated from here
./boost/multi_index/detail/safe_mode.hpp:164:54: warning: suggest parentheses around '&&' within '||'
./boost/multi_index/detail/safe_mode.hpp: In function 'bool boost::multi_index::safe_mode::check_dereferenceable_iterator(const Iterator&) [with Iterator = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >]':
./boost/multi_index/sequenced_index.hpp:510:5:   instantiated from 'void boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::relocate(boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::iterator, boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::iterator) [with SuperMeta = boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, TagList = boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::iterator = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >, typename SuperMeta::type::node_type = boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >]'
./pwiz/utility/misc/mru_list.hpp:74:7:   instantiated from 'bool pwiz::util::mru_list<Item>::insert(const item_type&) [with Item = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, item_type = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >]'
pwiz/data/msdata/SpectrumListCache.cpp:102:74:   instantiated from here
./boost/multi_index/detail/safe_mode.hpp:145:58: warning: suggest parentheses around '&&' within '||'
./boost/multi_index/detail/safe_mode.hpp: In function 'bool boost::multi_index::safe_mode::check_decrementable_iterator(const Iterator&) [with Iterator = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >]':
./boost/multi_index/detail/safe_mode.hpp:483:5:   instantiated from 'void boost::multi_index::safe_mode::safe_iterator<Iterator, Container>::decrement() [with Iterator = boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, Container = boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> >]'
./boost/multi_index/detail/iter_adaptor.hpp:63:5:   instantiated from 'static void boost::multi_index::detail::iter_adaptor_access::decrement(Class&) [with Class = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >]'
./boost/multi_index/detail/iter_adaptor.hpp:165:5:   instantiated from 'Derived& boost::multi_index::detail::bidirectional_iter_adaptor_base<Derived, Base>::operator--() [with Derived = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >, Base = boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >]'
./boost/multi_index/sequenced_index.hpp:265:39:   instantiated from 'void boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::pop_back() [with SuperMeta = boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, TagList = boost::mpl::vector0<mpl_::na>]'
./pwiz/utility/misc/mru_list.hpp:78:7:   instantiated from 'bool pwiz::util::mru_list<Item>::insert(const item_type&) [with Item = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, item_type = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >]'
pwiz/data/msdata/SpectrumListCache.cpp:102:74:   instantiated from here
./boost/multi_index/detail/safe_mode.hpp:157:60: warning: suggest parentheses around '&&' within '||'
./boost/multi_index/detail/safe_mode.hpp: In function 'bool boost::multi_index::safe_mode::check_same_owner(const Iterator&, const Iterator&) [with Iterator = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >]':
./boost/multi_index/detail/safe_mode.hpp:469:5:   instantiated from 'bool boost::multi_index::safe_mode::safe_iterator<Iterator, Container>::equal(const boost::multi_index::safe_mode::safe_iterator<Iterator, Container>&) const [with Iterator = boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, Container = boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> >, boost::multi_index::safe_mode::safe_iterator<Iterator, Container> = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >]'
./boost/multi_index/detail/iter_adaptor.hpp:51:21:   instantiated from 'static bool boost::multi_index::detail::iter_adaptor_access::equal(const Class&, const Class&) [with Class = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >]'
./boost/multi_index/detail/iter_adaptor.hpp:154:42:   instantiated from 'bool boost::multi_index::detail::operator==(const boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >&, const boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >&)'
./boost/operators.hpp:157:87:   instantiated from 'bool boost::operator!=(const boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >&, const boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >&)'
./boost/multi_index/sequenced_index.hpp:513:5:   instantiated from 'void boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::relocate(boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::iterator, boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::iterator) [with SuperMeta = boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, TagList = boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::iterator = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >, typename SuperMeta::type::node_type = boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >]'
./pwiz/utility/misc/mru_list.hpp:74:7:   instantiated from 'bool pwiz::util::mru_list<Item>::insert(const item_type&) [with Item = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, item_type = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >]'
pwiz/data/msdata/SpectrumListCache.cpp:102:74:   instantiated from here
./boost/multi_index/detail/safe_mode.hpp:171:41: warning: suggest parentheses around '&&' within '||'
./boost/multi_index/detail/safe_mode.hpp: In function 'bool boost::multi_index::safe_mode::check_incrementable_iterator(const Iterator&) [with Iterator = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >]':
./boost/multi_index/detail/safe_mode.hpp:476:5:   instantiated from 'void boost::multi_index::safe_mode::safe_iterator<Iterator, Container>::increment() [with Iterator = boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, Container = boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> >]'
./boost/multi_index/detail/iter_adaptor.hpp:57:5:   instantiated from 'static void boost::multi_index::detail::iter_adaptor_access::increment(Class&) [with Class = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >]'
./boost/multi_index/detail/iter_adaptor.hpp:159:5:   instantiated from 'Derived& boost::multi_index::detail::bidirectional_iter_adaptor_base<Derived, Base>::operator++() [with Derived = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >, Base = boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >]'
./boost/operators.hpp:275:5:   instantiated from 'boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > > boost::operator++(boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >&, int)'
./boost/multi_index/sequenced_index.hpp:299:5:   instantiated from 'boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::iterator boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::erase(boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::iterator) [with SuperMeta = boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, TagList = boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::iterator = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::bidir_node_iterator<boost::multi_index::detail::sequenced_index_node<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > > > >, boost::multi_index::detail::sequenced_index<boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na> > >, typename SuperMeta::type::node_type = boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >]'
./boost/multi_index/sequenced_index.hpp:265:39:   instantiated from 'void boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::pop_back() [with SuperMeta = boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, TagList = boost::mpl::vector0<mpl_::na>]'
./pwiz/utility/misc/mru_list.hpp:78:7:   instantiated from 'bool pwiz::util::mru_list<Item>::insert(const item_type&) [with Item = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, item_type = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >]'
pwiz/data/msdata/SpectrumListCache.cpp:102:74:   instantiated from here
./boost/multi_index/detail/safe_mode.hpp:151:58: warning: suggest parentheses around '&&' within '||'
./boost/multi_index/detail/safe_mode.hpp: In function 'bool boost::multi_index::safe_mode::check_same_owner(const Iterator&, const Iterator&) [with Iterator = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag> >]':
./boost/multi_index/detail/safe_mode.hpp:469:5:   instantiated from 'bool boost::multi_index::safe_mode::safe_iterator<Iterator, Container>::equal(const boost::multi_index::safe_mode::safe_iterator<Iterator, Container>&) const [with Iterator = boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, Container = boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag>, boost::multi_index::safe_mode::safe_iterator<Iterator, Container> = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag> >]'
./boost/multi_index/detail/iter_adaptor.hpp:51:21:   instantiated from 'static bool boost::multi_index::detail::iter_adaptor_access::equal(const Class&, const Class&) [with Class = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag> >]'
./boost/multi_index/detail/iter_adaptor.hpp:102:42:   instantiated from 'bool boost::multi_index::detail::operator==(const boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag> >&, const boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag> >&)'
./boost/multi_index/hashed_index.hpp:936:5:   instantiated from 'bool boost::multi_index::detail::hashed_index<KeyFromValue, Hash, Pred, SuperMeta, TagList, Category>::invariant_() const [with KeyFromValue = boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, Hash = boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, Pred = std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, SuperMeta = boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, TagList = boost::mpl::vector0<mpl_::na>, Category = boost::multi_index::detail::hashed_unique_tag]'
./boost/multi_index/sequenced_index.hpp:722:30:   instantiated from 'bool boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::invariant_() const [with SuperMeta = boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, TagList = boost::mpl::vector0<mpl_::na>]'
./boost/multi_index_container.hpp:713:30:   instantiated from 'bool boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::invariant_() const [with Value = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, IndexSpecifierList = boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, Allocator = std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >]'
./boost/multi_index_container.hpp:718:5:   instantiated from 'void boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::check_invariant_() const [with Value = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, IndexSpecifierList = boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, Allocator = std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >]'
./boost/multi_index_container.hpp:196:5:   instantiated from 'boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::multi_index_container(boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::ctor_args_list&, boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::allocator_type&) [with Value = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, IndexSpecifierList = boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, Allocator = std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::ctor_args_list = boost::tuples::cons<boost::tuples::null_type, boost::tuples::cons<boost::tuples::tuple<unsigned int, boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>, boost::tuples::null_type> >, boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::allocator_type = std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >]'
./pwiz/utility/misc/mru_list.hpp:67:70:   instantiated from 'pwiz::util::mru_list<Item>::mru_list(size_t) [with Item = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, size_t = unsigned int]'
pwiz/data/msdata/MemoryMRUCache.hpp:49:54:   instantiated from 'pwiz::msdata::MemoryMRUCache<PtrType>::MemoryMRUCache(pwiz::msdata::MemoryMRUCacheMode, size_t) [with PtrType = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, size_t = unsigned int]'
pwiz/data/msdata/SpectrumListCache.cpp:36:66:   instantiated from here
./boost/multi_index/detail/safe_mode.hpp:171:41: warning: suggest parentheses around '&&' within '||'
./boost/multi_index/detail/safe_mode.hpp: In function 'bool boost::multi_index::safe_mode::check_incrementable_iterator(const Iterator&) [with Iterator = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag> >]':
./boost/multi_index/detail/safe_mode.hpp:476:5:   instantiated from 'void boost::multi_index::safe_mode::safe_iterator<Iterator, Container>::increment() [with Iterator = boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, Container = boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag>]'
./boost/multi_index/detail/iter_adaptor.hpp:57:5:   instantiated from 'static void boost::multi_index::detail::iter_adaptor_access::increment(Class&) [with Class = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag> >]'
./boost/multi_index/detail/iter_adaptor.hpp:107:5:   instantiated from 'Derived& boost::multi_index::detail::forward_iter_adaptor_base<Derived, Base>::operator++() [with Derived = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag> >, Base = boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >]'
./boost/multi_index/hashed_index.hpp:941:48:   instantiated from 'bool boost::multi_index::detail::hashed_index<KeyFromValue, Hash, Pred, SuperMeta, TagList, Category>::invariant_() const [with KeyFromValue = boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, Hash = boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, Pred = std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, SuperMeta = boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, TagList = boost::mpl::vector0<mpl_::na>, Category = boost::multi_index::detail::hashed_unique_tag]'
./boost/multi_index/sequenced_index.hpp:722:30:   instantiated from 'bool boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::invariant_() const [with SuperMeta = boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, TagList = boost::mpl::vector0<mpl_::na>]'
./boost/multi_index_container.hpp:713:30:   instantiated from 'bool boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::invariant_() const [with Value = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, IndexSpecifierList = boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, Allocator = std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >]'
./boost/multi_index_container.hpp:718:5:   instantiated from 'void boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::check_invariant_() const [with Value = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, IndexSpecifierList = boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, Allocator = std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >]'
./boost/multi_index_container.hpp:196:5:   instantiated from 'boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::multi_index_container(boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::ctor_args_list&, boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::allocator_type&) [with Value = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, IndexSpecifierList = boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, Allocator = std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::ctor_args_list = boost::tuples::cons<boost::tuples::null_type, boost::tuples::cons<boost::tuples::tuple<unsigned int, boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>, boost::tuples::null_type> >, boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::allocator_type = std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >]'
./pwiz/utility/misc/mru_list.hpp:67:70:   instantiated from 'pwiz::util::mru_list<Item>::mru_list(size_t) [with Item = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, size_t = unsigned int]'
pwiz/data/msdata/MemoryMRUCache.hpp:49:54:   instantiated from 'pwiz::msdata::MemoryMRUCache<PtrType>::MemoryMRUCache(pwiz::msdata::MemoryMRUCacheMode, size_t) [with PtrType = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, size_t = unsigned int]'
pwiz/data/msdata/SpectrumListCache.cpp:36:66:   instantiated from here
./boost/multi_index/detail/safe_mode.hpp:151:58: warning: suggest parentheses around '&&' within '||'
./boost/multi_index/detail/safe_mode.hpp: In function 'bool boost::multi_index::safe_mode::check_dereferenceable_iterator(const Iterator&) [with Iterator = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag> >]':
./boost/multi_index/detail/safe_mode.hpp:461:5:   instantiated from 'boost::multi_index::safe_mode::safe_iterator<Iterator, Container>::reference boost::multi_index::safe_mode::safe_iterator<Iterator, Container>::dereference() const [with Iterator = boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, Container = boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag>, boost::multi_index::safe_mode::safe_iterator<Iterator, Container>::reference = const std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >&]'
./boost/multi_index/detail/iter_adaptor.hpp:45:26:   instantiated from 'static typename Class::reference boost::multi_index::detail::iter_adaptor_access::dereference(const Class&) [with Class = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag> >, typename Class::reference = const std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >&]'
./boost/multi_index/detail/iter_adaptor.hpp:97:52:   instantiated from 'boost::multi_index::detail::forward_iter_adaptor_base<Derived, Base>::reference boost::multi_index::detail::forward_iter_adaptor_base<Derived, Base>::operator*() const [with Derived = boost::multi_index::safe_mode::safe_iterator<boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::hashed_index<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, boost::mpl::vector0<mpl_::na>, boost::multi_index::detail::hashed_unique_tag> >, Base = boost::multi_index::detail::hashed_index_iterator<boost::multi_index::detail::hashed_index_node<boost::multi_index::detail::index_node_base<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::bucket_array<std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > > >, boost::multi_index::detail::forward_iter_adaptor_base<Derived, Base>::reference = const std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >&]'
./boost/multi_index/hashed_index.hpp:949:11:   instantiated from 'bool boost::multi_index::detail::hashed_index<KeyFromValue, Hash, Pred, SuperMeta, TagList, Category>::invariant_() const [with KeyFromValue = boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, Hash = boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, Pred = std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, SuperMeta = boost::multi_index::detail::nth_layer<2, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, TagList = boost::mpl::vector0<mpl_::na>, Category = boost::multi_index::detail::hashed_unique_tag]'
./boost/multi_index/sequenced_index.hpp:722:30:   instantiated from 'bool boost::multi_index::detail::sequenced_index<SuperMeta, TagList>::invariant_() const [with SuperMeta = boost::multi_index::detail::nth_layer<1, std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > > >, TagList = boost::mpl::vector0<mpl_::na>]'
./boost/multi_index_container.hpp:713:30:   instantiated from 'bool boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::invariant_() const [with Value = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, IndexSpecifierList = boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, Allocator = std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >]'
./boost/multi_index_container.hpp:718:5:   instantiated from 'void boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::check_invariant_() const [with Value = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, IndexSpecifierList = boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, Allocator = std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >]'
./boost/multi_index_container.hpp:196:5:   instantiated from 'boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::multi_index_container(boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::ctor_args_list&, boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::allocator_type&) [with Value = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, IndexSpecifierList = boost::multi_index::indexed_by<boost::multi_index::sequenced<>, boost::multi_index::hashed_unique<boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, mpl_::na, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, Allocator = std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::ctor_args_list = boost::tuples::cons<boost::tuples::null_type, boost::tuples::cons<boost::tuples::tuple<unsigned int, boost::multi_index::identity<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::hash<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, std::equal_to<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>, boost::tuples::null_type> >, boost::multi_index::multi_index_container<Value, IndexSpecifierList, Allocator>::allocator_type = std::allocator<std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> > >]'
./pwiz/utility/misc/mru_list.hpp:67:70:   instantiated from 'pwiz::util::mru_list<Item>::mru_list(size_t) [with Item = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, size_t = unsigned int]'
pwiz/data/msdata/MemoryMRUCache.hpp:49:54:   instantiated from 'pwiz::msdata::MemoryMRUCache<PtrType>::MemoryMRUCache(pwiz::msdata::MemoryMRUCacheMode, size_t) [with PtrType = std::pair<unsigned int, boost::shared_ptr<pwiz::msdata::Spectrum> >, size_t = unsigned int]'
pwiz/data/msdata/SpectrumListCache.cpp:36:66:   instantiated from here
./boost/multi_index/detail/safe_mode.hpp:145:58: warning: suggest parentheses around '&&' within '||'
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/utility/misc/IntegerSet.cpp -o pwiz/utility/misc/IntegerSet.o
pwiz/utility/misc/IntegerSet.cpp: In member function 'bool pwiz::util::IntegerSet::Iterator::operator==(const pwiz::util::IntegerSet::Iterator&) const':
pwiz/utility/misc/IntegerSet.cpp:308:49: warning: suggest parentheses around '&&' within '||'
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/utility/misc/Base64.cpp -o pwiz/utility/misc/Base64.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/utility/misc/IterationListener.cpp -o pwiz/utility/misc/IterationListener.o
pwiz/utility/misc/IterationListener.cpp: In member function 'pwiz::util::IterationListener::Status pwiz::util::IterationListenerRegistry::Impl::broadcastUpdateMessage(const pwiz::util::IterationListener::UpdateMessage&) const':
pwiz/utility/misc/IterationListener.cpp:76:94: warning: suggest parentheses around '&&' within '||'
pwiz/utility/misc/IterationListener.cpp:78:87: warning: suggest parentheses around '&&' within '||'
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/utility/misc/MSIHandler.cpp -o pwiz/utility/misc/MSIHandler.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/utility/misc/Filesystem.cpp -o pwiz/utility/misc/Filesystem.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/utility/misc/TabReader.cpp -o pwiz/utility/misc/TabReader.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/utility/misc/random_access_compressed_ifstream.cpp -o pwiz/utility/misc/random_access_compressed_ifstream.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/utility/misc/SHA1.cpp -o pwiz/utility/misc/SHA1.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/utility/misc/SHA1Calculator.cpp -o pwiz/utility/misc/SHA1Calculator.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c pwiz/utility/misc/sha1calc.cpp -o pwiz/utility/misc/sha1calc.o
g++  -I"E:/biocbld/BBS-2˜1.9-B/R/include" -D_LARGEFILE_SOURCE -I./boost_aux/ -I. -I. -DHAVE_PWIZ_MZML_LIB    -I"E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/include"      -O2 -Wall  -mtune=core2 -c random_access_gzFile.cpp -o random_access_gzFile.o
g++ -shared -s -static-libgcc -o mzR.dll tmp.def cramp.o ramp_base64.o ramp.o RcppRamp.o RcppRampModule.o rnetCDF.o ./boost/system/src/error_code.o ./boost/regex/src/posix_api.o ./boost/regex/src/fileiter.o ./boost/regex/src/regex_raw_buffer.o ./boost/regex/src/cregex.o ./boost/regex/src/regex_debug.o ./boost/regex/src/instances.o ./boost/regex/src/icu.o ./boost/regex/src/usinstances.o ./boost/regex/src/regex.o ./boost/regex/src/wide_posix_api.o ./boost/regex/src/regex_traits_defaults.o ./boost/regex/src/winstances.o ./boost/regex/src/wc_regex_traits.o ./boost/regex/src/c_regex_traits.o ./boost/regex/src/cpp_regex_traits.o ./boost/regex/src/static_mutex.o ./boost/regex/src/w32_regex_traits.o ./pwiz/data/msdata/Version.o ./pwiz/utility/minimxml/XMLWriter.o ./pwiz/utility/minimxml/SAXParser.o ./boost/iostreams/src/zlib.o ./boost/filesystem/src/operations.o ./pwiz/data/common/MemoryIndex.o ./pwiz/data/common/CVTranslator.o ./pwiz/data/common/cv.o ./pwiz/data/common/ParamTypes.o ./pwiz/data/common/BinaryIndexStream.o ./pwiz/data/common/diff_std.o ./pwiz/data/msdata/SpectrumList_MGF.o ./pwiz/data/msdata/DefaultReaderList.o ./pwiz/data/msdata/ChromatogramList_mzML.o ./pwiz/data/msdata/examples.o ./pwiz/data/msdata/Serializer_mzML.o ./pwiz/data/msdata/Serializer_MSn.o ./pwiz/data/msdata/Reader.o ./pwiz/data/msdata/Serializer_MGF.o ./pwiz/data/msdata/Serializer_mzXML.o ./pwiz/data/msdata/SpectrumList_mzML.o ./pwiz/data/msdata/SpectrumList_MSn.o ./pwiz/data/msdata/BinaryDataEncoder.o ./pwiz/data/msdata/Diff.o ./pwiz/data/msdata/MSData.o ./pwiz/data/msdata/References.o ./pwiz/data/msdata/SpectrumList_mzXML.o ./pwiz/data/msdata/IO.o ./pwiz/data/msdata/SpectrumList_BTDX.o ./pwiz/data/msdata/SpectrumInfo.o ./pwiz/data/msdata/RAMPAdapter.o ./pwiz/data/msdata/ramp/wglob.o ./pwiz/data/msdata/LegacyAdapter.o ./pwiz/data/msdata/SpectrumIterator.o ./pwiz/data/msdata/MSDataFile.o ./pwiz/data/msdata/SpectrumListCache.o ./pwiz/utility/misc/IntegerSet.o ./pwiz/utility/misc/Base64.o ./pwiz/utility/misc/IterationListener.o ./pwiz/utility/misc/MSIHandler.o ./pwiz/utility/misc/Filesystem.o ./pwiz/utility/misc/TabReader.o ./pwiz/utility/misc/random_access_compressed_ifstream.o ./pwiz/utility/misc/SHA1.o ./pwiz/utility/misc/SHA1Calculator.o ./pwiz/utility/misc/sha1calc.o ./random_access_gzFile.o E:/biocbld/bbs-2.9-bioc/R/library/Rcpp/lib/i386/libRcpp.a -L./win//i386 -lws2_32 -lnetcdf -lz -LE:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.9-bioc/meat/mzR.Rcheck/mzR/libs/i386
** R
** inst
** preparing package for lazy loading
Creating a generic function for 'close' from package 'base' in package 'mzR'
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'mzR.Rnw' 
** testing if installed package can be loaded

* DONE (mzR)

mzR.Rcheck/mzR-Ex.timings:

nameusersystemelapsed
metadata0.460.191.04
mzR-class0.310.080.39
openMSfile0.390.190.57
peaks0.440.120.58