Package: ENCODEFig4Band4D

Version: 1.0.2

Command: rm -rf ENCODEFig4Band4D.buildbin-libdir && mkdir ENCODEFig4Band4D.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=ENCODEFig4Band4D.buildbin-libdir ENCODEFig4Band4D_1.0.2.tar.gz >ENCODEFig4Band4D-install.out 2>&1 && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --library=ENCODEFig4Band4D.buildbin-libdir --install="check:ENCODEFig4Band4D-install.out" --force-multiarch --no-vignettes --timings ENCODEFig4Band4D_1.0.2.tar.gz && mv ENCODEFig4Band4D.buildbin-libdir/* ENCODEFig4Band4D.Rcheck/ && rmdir ENCODEFig4Band4D.buildbin-libdir

StartedAt: 2012-01-09 14:05:11 -0800 (Mon, 09 Jan 2012)

EndedAt: 2012-01-09 14:06:01 -0800 (Mon, 09 Jan 2012)

EllapsedTime: 50.0 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: ENCODEFig4Band4D.Rcheck

Warnings: 3

* using log directory 'D:/biocbld/bbs-2.9-data-experiment/meat/ENCODEFig4Band4D.Rcheck'
* using R version 2.14.1 (2011-12-22)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'ENCODEFig4Band4D/DESCRIPTION' ... OK
* this is package 'ENCODEFig4Band4D' version '1.0.2'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'ENCODEFig4Band4D' can be installed ... OK
* checking installed package size ... NOTE
  installed size is  6.0Mb
  sub-directories of 1Mb or more:
    data   5.5Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... WARNING
Non-standard license specification:
  Artistic-2.0 # modify as desired
Standardizable: FALSE
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... WARNING
'library' or 'require' calls not declared from:
  'earth' 'randomForest'
See the information on DESCRIPTION files in the chapter 'Creating R
packages' of the 'Writing R Extensions' manual.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
File 'ENCODEFig4Band4D/R/zzz.R':
  .onAttach calls:
    library(randomForest)
    library(earth)

Package startup functions should not change the search path.
See section 'Good practice' in ?.onAttach.

* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  Warning: package needs dependence on R (>= 2.10)
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

WARNING: There were 3 warnings, see
  'D:/biocbld/bbs-2.9-data-experiment/meat/ENCODEFig4Band4D.Rcheck/00check.log'
for details

install for i386

* installing *source* package 'ENCODEFig4Band4D' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'ENCODEFig4Band4D.Rnw' 
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'ENCODEFig4Band4D' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ENCODEFig4Band4D' as ENCODEFig4Band4D_1.0.2.zip

* DONE (ENCODEFig4Band4D)