estrogen 1.8.5
R. Gentleman
| Snapshot Date: 2011-07-01 11:15:06 -0700 (Fri, 01 Jul 2011) | | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/estrogen | | Last Changed Rev: 1036 / Revision: 1675 | | Last Changed Date: 2009-10-12 11:55:42 -0700 (Mon, 12 Oct 2009) |
| wilson2 | Linux (openSUSE 11.4) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| petty | Mac OS X Snow Leopard (10.6.7) / i386 | OK | [ OK ] | OK |
* using log directory '/Users/biocbuild/bbs-2.9-data-experiment/meat/estrogen.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-04-24 r55634)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'estrogen/DESCRIPTION' ... OK
* this is package 'estrogen' version '1.8.5'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'estrogen' can be installed ... OK
* checking installed package size ... NOTE
installed size is 83.8Mb
sub-directories of 1Mb or more:
doc 1.3Mb
extdata 82.4Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking sizes of PDF files under 'inst/doc' ... NOTE
'qpdf' made some significant size reductions:
compacted 'estrogen.pdf' from 975Kb to 673Kb
consider running tools::compactPDF() on these files
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK
* installing *source* package 'estrogen' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation("pkgname")'.
Loading required package: hgu95av2
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
there is no package called 'hgu95av2'
Loading required package: hgu95av2cdf
Loading required package: vsn
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
'estrogen.Rnw'
** testing if installed package can be loaded
* DONE (estrogen)