Shraddha Pai
| Snapshot Date: 2020-10-11 14:50:22 -0400 (Sun, 11 Oct 2020) |
| URL: https://git.bioconductor.org/packages/netDx |
| Branch: RELEASE_3_11 |
| Last Commit: e3f3188 |
| Last Changed Date: 2020-07-16 06:47:41 -0400 (Thu, 16 Jul 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-12 12:29:29 -0400 (Mon, 12 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE netDx PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1186/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| netDx 1.0.3 Shraddha Pai
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped |
| Package: netDx |
| Version: 1.0.3 |
| Command: rm -rf netDx.buildbin-libdir && mkdir netDx.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=netDx.buildbin-libdir netDx_1.0.3.tar.gz |
| StartedAt: 2020-10-12 11:50:43 -0400 (Mon, 12 Oct 2020) |
| EndedAt: 2020-10-12 11:51:53 -0400 (Mon, 12 Oct 2020) |
| EllapsedTime: 69.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: netDx_1.0.3.zip |
| PackageFileSize: 2.184 MiB |
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### Running command:
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### rm -rf netDx.buildbin-libdir && mkdir netDx.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=netDx.buildbin-libdir netDx_1.0.3.tar.gz
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install for i386
* installing *source* package 'netDx' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'netDx'
finding HTML links ... done
MB.pheno html
RR_featureTally html
avgNormDiff html
buildPredictor html
buildPredictor_sparseGenetic html
callFeatSel html
cleanPathwayName html
cnv_GR html
cnv_TTstatus html
cnv_netPass html
cnv_netScores html
cnv_patientNetCount html
cnv_pheno html
compareShortestPath html
compileFeatureScores html
compileFeatures html
confmat html
convertProfileToNetworks html
countIntType html
countIntType_batch html
countPatientsInNet html
createPSN_MultiData html
dataList2List html
dot-get_cache html
enrichLabelNets html
featScores html
fetchPathwayDefinitions html
genes html
getCorrType html
getEMapInput html
getEMapInput_many html
getEnr html
getFeatureScores html
getFileSep html
getGMjar_path html
getNetConsensus html
getOR html
getPatientPredictions html
getPatientRankings html
getRegionOL html
getSimilarity html
makePSN_NamedMatrix html
makePSN_RangeSets html
makeQueries html
mapNamedRangesToSets html
matrix_getIJ html
moveInteractionNets html
normDiff html
npheno html
pathwayList html
pathway_GR html
perfCalc html
pheno html
pheno_full html
plotEmap html
plotIntegratedPatientNetwork html
plotPerf html
plotPerf_multi html
predRes html
predictPatientLabels html
pruneNetByStrongest html
pruneNets html
readPathways html
runFeatureSelection html
runQuery html
setupFeatureDB html
silh html
sim.eucscale html
sim.pearscale html
simpleCap html
sparsify2 html
sparsify3 html
splitTestTrain html
splitTestTrain_resampling html
updateNets html
writeNetsSIF html
writeQueryBatchFile html
writeQueryFile html
writeWeightedNets html
xpr html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'netDx' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'netDx' as netDx_1.0.3.zip
* DONE (netDx)