Back to Multiple platform build/check report for BioC 3.15
ABC[D]EFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2022-03-18 11:07:20 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for decoupleR on riesling1


To the developers/maintainers of the decoupleR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/decoupleR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 474/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
decoupleR 2.1.6  (landing page)
Pau Badia-i-Mompel
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/decoupleR
git_branch: master
git_last_commit: bd34ee4
git_last_commit_date: 2022-02-14 09:25:53 -0400 (Mon, 14 Feb 2022)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: decoupleR
Version: 2.1.6
Command: rm -rf decoupleR.buildbin-libdir && mkdir decoupleR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=decoupleR.buildbin-libdir decoupleR_2.1.6.tar.gz
StartedAt: 2022-03-17 21:03:58 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:05:11 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 73.5 seconds
RetCode: 0
Status:   OK  
PackageFile: decoupleR_2.1.6.zip
PackageFileSize: 1.237 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf decoupleR.buildbin-libdir && mkdir decoupleR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=decoupleR.buildbin-libdir decoupleR_2.1.6.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'decoupleR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'decoupleR'
    finding HTML links ... done
    check_corr                              html  
    convert_f_defaults                      html  
    decouple                                html  
    decoupleR-package                       html  
    dot-decoupler_mat_format                html  
    dot-decoupler_network_format            html  
    dot-fit_preprocessing                   html  
    extract_sets                            html  
    filt_minsize                            html  
    get_profile_of                          html  
    get_toy_data                            html  
    intersect_regulons                      html  
    pipe                                    html  
    pivot_wider_profile                     html  
    randomize_matrix                        html  
    rename_net                              html  
    run_aucell                              html  
    run_consensus                           html  
    run_fgsea                               html  
    run_gsva                                html  
    run_mdt                                 html  
    run_mlm                                 html  
    run_ora                                 html  
    run_udt                                 html  
    run_ulm                                 html  
    run_viper                               html  
    run_wmean                               html  
    run_wsum                                html  
    show_methods                            html  
    tidyeval                                html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'decoupleR' as decoupleR_2.1.6.zip
* DONE (decoupleR)