Back to Multiple platform build/check report for BioC 3.15
ABCDEFGHIJKLMNO[P]QRSTUVWXYZ

This page was generated on 2022-03-18 11:08:17 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for perturbatr on riesling1


To the developers/maintainers of the perturbatr package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/perturbatr.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1408/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
perturbatr 1.15.0  (landing page)
Simon Dirmeier
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/perturbatr
git_branch: master
git_last_commit: 246c8c8
git_last_commit_date: 2021-10-26 12:42:48 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    ERROR  
riesling1Windows Server 2019 Standard / x64  OK    OK    ERROR    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: perturbatr
Version: 1.15.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL perturbatr
StartedAt: 2022-03-17 15:53:58 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 15:54:55 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 56.8 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL perturbatr
###
##############################################################################
##############################################################################


* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'perturbatr' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'perturbatr'
    finding HTML links ... done
    HMAnalysedPerturbationData-class        html  
    NetworkAnalysedPerturbationData-class   html  
    PerturbationData-class                  html  
    bootstrap                               html  
    dataSet-methods                         html  
    diffuse-methods                         html  
    filter-methods                          html  
    geneEffects-methods                     html  
    graph-methods                           html  
    hm-methods                              html  
    inference-methods                       html  
    isBootstrapped-methods                  html  
    modelFit-methods                        html  
    nestedGeneEffects-methods               html  
    params-methods                          html  
    perturbatr-package                      html  
    plot.NetworkAnalysedPerturbationData    html  
    plot.PerturbationData                   html  
    rbind.PerturbationData                  html  
    rnaiscreen                              html  
    setModelData-methods                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (perturbatr)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'DIAlignR' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'GGPA' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'SeqSQC' is missing or broken
 done