Egon Willighagen
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/rWikiPathways |
| git_branch: master |
| git_last_commit: 5c7ce0e |
| git_last_commit_date: 2021-10-26 12:43:34 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:08:34 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the rWikiPathways package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rWikiPathways.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1692/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| rWikiPathways 1.15.0 (landing page) Egon Willighagen
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: rWikiPathways |
| Version: 1.15.0 |
| Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL rWikiPathways |
| StartedAt: 2022-03-17 15:52:29 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 15:53:41 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 71.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL rWikiPathways
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'rWikiPathways' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'rWikiPathways'
finding HTML links ... done
downloadPathwayArchive html
findPathwayIdsByLiterature html
findPathwayIdsByText html
findPathwayIdsByXref html
findPathwayNamesByLiterature html
findPathwayNamesByText html
findPathwayNamesByXref html
findPathwayUrlsByLiterature html
findPathwayUrlsByText html
findPathwayUrlsByXref html
findPathwaysByLiterature html
findPathwaysByText html
findPathwaysByXref html
getCurationTagNames html
getCurationTags html
getEveryCurationTag html
getOntologyTermIds html
getOntologyTermNames html
getOntologyTerms html
getPathway html
getPathwayHistory html
getPathwayIdsByCurationTag html
getPathwayIdsByOntologyTerm html
getPathwayIdsByParentOntologyTerm html
getPathwayInfo html
getPathwaysByCurationTag html
getPathwaysByOntologyTerm html
getPathwaysByParentOntologyTerm html
getRecentChanges html
getRecentChangesIds html
getRecentChangesNames html
getXrefList html
listOrganisms html
listPathwayIds html
listPathwayNames html
listPathwayUrls html
listPathways html
readGMT html
readGMTnames html
readPathwayGMT html
wikipathwaysAPI html
wikipathwaysGET html
writeGMT html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rWikiPathways)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'Dune' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'spicyR' is missing or broken
done