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This page was generated on 2022-03-18 11:08:24 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for ramwas on riesling1


To the developers/maintainers of the ramwas package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ramwas.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1531/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ramwas 1.19.0  (landing page)
Andrey A Shabalin
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/ramwas
git_branch: master
git_last_commit: fc18e54
git_last_commit_date: 2021-10-26 12:32:07 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ramwas
Version: 1.19.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL ramwas
StartedAt: 2022-03-17 15:50:17 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 15:51:52 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 94.8 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL ramwas
###
##############################################################################
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'ramwas' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c rw_c_code.c -o rw_c_code.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o ramwas.dll tmp.def rw_c_code.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-ramwas/00new/ramwas/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ramwas'
    finding HTML links ... done
    MakeBED                                 html  
    QCs                                     html  
    RaMWAS                                  html  
    cachedRDSload                           html  
    findBestNpvs                            html  
    get                                     html  
    getCpGset                               html  
    injectSNPsMAF                           html  
    finding level-2 HTML links ... done

    insilicoFASTQ                           html  
    isAbsolutePath                          html  
    makefullpath                            html  
    manhattan                               html  
    mat2cols                                html  
    orthonormalizeCovariates                html  
    parameterDump                           html  
    parameterPreprocess                     html  
    parametersFromFile                      html  
    pipeline                                html  
    plotCV                                  html  
    plotFragmentSizeDistributionEstimate    html  
    plotPC                                  html  
    processCommandLine                      html  
    pvalue2qvalue                           html  
    qqplotFast                              html  
    ramwas0createArtificialData             html  
    ramwasAnnotateLocations                 html  
    ramwasParameters                        html  
    rowcolSumSq                             html  
    rwDataClass-class                       html  
    subsetData                              html  
    testPhenotype                           html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ramwas)
Making 'packages.html' ... done