Mattia Pelizzola
| Snapshot Date: 2024-10-16 14:00 -0400 (Wed, 16 Oct 2024) |
| git_url: https://git.bioconductor.org/packages/MEDME |
| git_branch: RELEASE_3_19 |
| git_last_commit: 70dcfdd |
| git_last_commit_date: 2024-04-30 10:18:43 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-10-18 20:38 -0400 (Fri, 18 Oct 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4763 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4500 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4530 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4480 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1195/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MEDME 1.64.0 (landing page) Mattia Pelizzola
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
|
To the developers/maintainers of the MEDME package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MEDME.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: MEDME |
| Version: 1.64.0 |
| Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD INSTALL MEDME |
| StartedAt: 2024-10-16 16:34:16 -0400 (Wed, 16 Oct 2024) |
| EndedAt: 2024-10-16 16:34:30 -0400 (Wed, 16 Oct 2024) |
| EllapsedTime: 14.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD INSTALL MEDME
###
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* installing to library ‘/home/biocbuild/bbs-3.19-bioc/R/site-library’
* installing *source* package ‘MEDME’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
gcc -I"/home/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c MEDMEweight.c -o MEDMEweight.o
MEDMEweight.c: In function ‘MEDMEweight’:
MEDMEweight.c:78:19: warning: ‘weight’ may be used uninitialized in this function [-Wmaybe-uninitialized]
78 | weightSum = weightSum + weight;
| ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
MEDMEweight.c:91:9: warning: ‘Max’ may be used uninitialized in this function [-Wmaybe-uninitialized]
91 | if(AMSfinal[i] > Max) {AMSfinal[i] = Max;}
| ^
MEDMEweight.c:92:42: warning: ‘Min’ may be used uninitialized in this function [-Wmaybe-uninitialized]
92 | if(AMSfinal[i] < Min) {AMSfinal[i] = Min;}
| ~~~~~~~~~~~~^~~~~
MEDMEweight.c:90:33: warning: ‘E’ may be used uninitialized in this function [-Wmaybe-uninitialized]
90 | AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B));
| ^~~~~~~~
MEDMEweight.c:90:47: warning: ‘D’ may be used uninitialized in this function [-Wmaybe-uninitialized]
90 | AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B));
| ~~~^~~~~~~
MEDMEweight.c:90:63: warning: ‘C’ may be used uninitialized in this function [-Wmaybe-uninitialized]
90 | AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B));
| ~~~~~~^~~~
MEDMEweight.c:90:33: warning: ‘B’ may be used uninitialized in this function [-Wmaybe-uninitialized]
90 | AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B));
| ^~~~~~~~
gcc -shared -L/home/biocbuild/bbs-3.19-bioc/R/lib -L/usr/local/lib -o MEDME.so MEDMEweight.o -L/home/biocbuild/bbs-3.19-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.19-bioc/R/site-library/00LOCK-MEDME/00new/MEDME/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MEDME)