| Back to Multiple platform build/check report for BioC 3.19: simplified long |
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This page was generated on 2024-10-18 20:39 -0400 (Fri, 18 Oct 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4763 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4500 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4530 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4480 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1583/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| PLSDAbatch 1.0.0 (landing page) Yiwen (Eva) Wang
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
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To the developers/maintainers of the PLSDAbatch package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/PLSDAbatch.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: PLSDAbatch |
| Version: 1.0.0 |
| Command: chmod a+r PLSDAbatch -R && E:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data PLSDAbatch |
| StartedAt: 2024-10-16 21:08:55 -0400 (Wed, 16 Oct 2024) |
| EndedAt: 2024-10-16 21:11:27 -0400 (Wed, 16 Oct 2024) |
| EllapsedTime: 151.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r PLSDAbatch -R && E:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data PLSDAbatch ### ############################################################################## ############################################################################## * checking for file 'PLSDAbatch/DESCRIPTION' ... OK * preparing 'PLSDAbatch': * checking DESCRIPTION meta-information ...Warning in person1(given = given[[i]], family = family[[i]], middle = middle[[i]], : It is recommended to use 'given' instead of 'middle'. OK * installing the package to process help pages Loading required namespace: PLSDAbatch Warning: replacing previous import 'mixOmics::pca' by 'vegan::pca' when loading 'PLSDAbatch' * saving partial Rd database * creating vignettes ... ERROR --- re-building 'brief_vignette.Rmd' using rmarkdown Quitting from lines 629-656 [ADalignment] (brief_vignette.Rmd) Error: processing vignette 'brief_vignette.Rmd' failed with diagnostics: 'data' must be of a vector type, was 'NULL' --- failed re-building 'brief_vignette.Rmd' SUMMARY: processing the following file failed: 'brief_vignette.Rmd' Error: Vignette re-building failed. Execution halted