Back to Multiple platform build/check report for BioC 3.19:   simplified   long
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This page was generated on 2024-10-18 20:42 -0400 (Fri, 18 Oct 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4763
palomino7Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4500
merida1macOS 12.7.5 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4530
kjohnson1macOS 13.6.6 Venturaarm644.4.1 (2024-06-14) -- "Race for Your Life" 4480
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1532/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pcxn 2.26.0  (landing page)
Sokratis Kariotis
Snapshot Date: 2024-10-16 14:00 -0400 (Wed, 16 Oct 2024)
git_url: https://git.bioconductor.org/packages/pcxn
git_branch: RELEASE_3_19
git_last_commit: cf7a4c0
git_last_commit_date: 2024-04-30 11:02:12 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino7Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published


BUILD BIN results for pcxn on kjohnson1

To the developers/maintainers of the pcxn package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/pcxn.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: pcxn
Version: 2.26.0
Command: rm -rf pcxn.buildbin-libdir && mkdir pcxn.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh pcxn_2.26.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R pcxn.buildbin-libdir
StartedAt: 2024-10-18 19:54:48 -0400 (Fri, 18 Oct 2024)
EndedAt: 2024-10-18 19:54:54 -0400 (Fri, 18 Oct 2024)
EllapsedTime: 5.7 seconds
RetCode: 0
Status:   OK  
PackageFile: pcxn_2.26.0.tgz
PackageFileSize: 188 KiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf pcxn.buildbin-libdir && mkdir pcxn.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh pcxn_2.26.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R pcxn.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=pcxn.buildbin-libdir pcxn_2.26.0.tar.gz'
>>>>>>> 

* installing *source* package ‘pcxn’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in fun(libname, pkgname) :
  Package 'pcxn' is deprecated and will be removed from Bioconductor
  version 3.20
** testing if installed package can be loaded from final location
Warning in fun(libname, pkgname) :
  Package 'pcxn' is deprecated and will be removed from Bioconductor
  version 3.20
** testing if installed package keeps a record of temporary installation path
* DONE (pcxn)