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BioC 3.2: BUILD report for genoset on oaxaca

This page was generated on 2015-08-24 10:56:37 -0700 (Mon, 24 Aug 2015).

Package 416/1071HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
genoset 1.23.5
Peter M. Haverty
Snapshot Date: 2015-08-23 16:24:14 -0700 (Sun, 23 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/genoset
Last Changed Rev: 106677 / Revision: 107696
Last Changed Date: 2015-07-22 20:15:59 -0700 (Wed, 22 Jul 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK [ OK ] WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: genoset
Version: 1.23.5
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data genoset
StartedAt: 2015-08-23 18:44:59 -0700 (Sun, 23 Aug 2015)
EndedAt: 2015-08-23 18:45:00 -0700 (Sun, 23 Aug 2015)
EllapsedTime: 1.5 seconds
RetCode: 0
Status:  OK 
PackageFile: genoset_1.23.5.tar.gz
PackageFileSize: 112.9 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data genoset
###
##############################################################################
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* checking for file ‘genoset/DESCRIPTION’ ... OK
* preparing ‘genoset’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
Warning: bad markup (extra space?) at GenoSet.Rd:15:56
Warning: bad markup (extra space?) at baf2mbaf.Rd:10:61
Warning: bad markup (extra space?) at calcGC.Rd:10:58
Warning: bad markup (extra space?) at calcGC.Rd:13:59
Warning: bad markup (extra space?) at do_rledf_views.Rd:17:56
Warning: bad markup (extra space?) at gcCorrect.Rd:12:60
Warning: bad markup (extra space?) at genoPlot-methods.Rd:23:56
Warning: bad markup (extra space?) at genoPlot-methods.Rd:56:56
Warning: bad markup (extra space?) at genomeAxis.Rd:13:59
Warning: bad markup (extra space?) at runCBS.Rd:17:63
Warning: bad markup (extra space?) at segs2Rle.Rd:11:56
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
* building ‘genoset_1.23.5.tar.gz’